| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1493 |
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| Symbol | |
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| ID | 4081170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1555610 |
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| End bp | 1556950 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009859 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_616539 |
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| Protein GI | 103486978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.42537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC AAACCGCCAC ACCGCGCAGC TTTTCTGCCT CCGTTCCGTT GAAGGGCAGG
ATCGCCATTC CGGGCGACAA GAGCATCTCG CACCGATCGC TGATGCTGTC GGCGCTGGCC
GTCGGCGAAA GCCGCGTCGC CGGCCTGCTC GAAGGGCATG ATGTCCTCGC GACCGCCGCC
GCGATGCGCG CCATGGGGGC CGATATCGCG CGCCGCGACG ACGGCGAATG GCGCATCCAC
GGCGTCGGCG TCGGCGGCTT GCTCCAGCCG CGGGGCGCGC TCGACATGGG GAACAGCGGC
ACGTCGACAC GTCTGCTGAT GGGGCTCGTC GCGAGCCACC CGATCACCGC CACTTTCGTC
GGCGACGCCA GCCTGTCGGG TCGCCCGATG GGGCGCGTCA TCGATCCGCT GACCCAGATG
GGCGCCGACA TCAGCGCCTC GCCGGGCGCC AGGGGGGCAA AAACTCTGCC GCTGATGGTC
CGCGGCCTCG CGCCCGCCAT TCCCCTCTCC TACCGCCTGC CGATGGCGTC GGCGCAGGTG
AAGAGCGCGA TCCTTCTCGC CGGACTCAAT ACGCCCGGCG TCACCGAAGT CATCGAGCCG
GTGCCCACGC GCGACCACAG CGAGCGGATG CTCGGCGCCT TTGGCGCCGA TCTGACCGTC
GACATCGACG CGGGCGGCAC GCGCCATATC CGTATCCGCG GCGAAGCCGA TCTCAAGCCG
CAGGCGATCA TCGTCCCCGG TGATCCCTCC TCGGCCGCCT TCTTTATCGT TGCGGCGCTC
ATCGTGCCCG GTTCGGACGT CACCATCGCC AACGTCGGTC TCAATCCGAC GCGCGCCGGG
CTGGTCGAGG TTCTGAAGGC GATGGGCGGC GACATCGAAC TGCTCGACCG GCGCGAAATC
GGCGGCGAAC CCGTCGCCGA CCTGCGCGTG CGCCACAGCG TGCTCAAAGG CATCGAGGTC
GACCCGGCGG TTGCGCCGAG CATGATCGAT GAGTTTCCAG TCCTCTTCGT TGCCGCGACG
CTCGCCGAAG GCCGCACGGT GACCACGGGG CTCGATGAAC TGCGCGTCAA GGAAAGCGAC
CGCCTTGCCG TCATGGCGAC CGGGCTCAAG GCCATCGGCG CGCGTGTCGA GGAAAGCCAA
GACGGCCTTG TCATTGATGG CACCGGCGGC GATCCGCTAG CCGGCGGCGC GACCATCGCC
GGCCATCTCG ATCATCGCAT CTGCATGAGC TTCGCAATCG CGGGGCTTGT CAGCAAGGCG
CCGGTGACGG TCGACGACAT CGCCCCCGTC GCAACGAGCT TCCCCAATTT CGAGGCATTG
CTTGCGGGTT TGCAACAATG A
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| Protein sequence | MTDQTATPRS FSASVPLKGR IAIPGDKSIS HRSLMLSALA VGESRVAGLL EGHDVLATAA
AMRAMGADIA RRDDGEWRIH GVGVGGLLQP RGALDMGNSG TSTRLLMGLV ASHPITATFV
GDASLSGRPM GRVIDPLTQM GADISASPGA RGAKTLPLMV RGLAPAIPLS YRLPMASAQV
KSAILLAGLN TPGVTEVIEP VPTRDHSERM LGAFGADLTV DIDAGGTRHI RIRGEADLKP
QAIIVPGDPS SAAFFIVAAL IVPGSDVTIA NVGLNPTRAG LVEVLKAMGG DIELLDRREI
GGEPVADLRV RHSVLKGIEV DPAVAPSMID EFPVLFVAAT LAEGRTVTTG LDELRVKESD
RLAVMATGLK AIGARVEESQ DGLVIDGTGG DPLAGGATIA GHLDHRICMS FAIAGLVSKA
PVTVDDIAPV ATSFPNFEAL LAGLQQ
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