Gene Sala_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1487 
Symbol 
ID4081259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1551452 
End bp1552255 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID638009852 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_616533 
Protein GI103486972 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.404398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0691329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TGCCCGCTTT CGACACGATC AGGCTCGACT TCGCCGATGC CGTCGCGACG 
ATCACGCTCA ACCGCCCCGA CCGGCTCAAT TCGATGCCGC CGGAAATGGC CGACGAGATC
CGCGCCGCGC TCGATCACCT GCCCGCCCTC GGCGCGCGCG CGCTGCTCAT CACGGGCGAA
GGTCGCGGCT TTTGTTCGGG CGCCGACCTC GCGGGCGACC GTTCGGGCGG CGCCGTCGGC
GGTGGCGCAC GCAGCCGCAA TGCGCTGCGC GGCCATTACA ACCCGATGTT GCTCGCGCTT
GCCAACCTCG ACATTCCCGT CGTCGTCGCG GTCAATGGCC CGGCGGCGGG CGTCGGGTGC
AGTTTCGCGC TGTCGGGCGA TTTCACCATC GCGGGCAAGA GCGCCTATTT CCTCCAGGCA
TTCGTGAACA TCGGCCTTGT CCCCGATGGC GGTTCGTCGT GGCTGCTGCC GCGCCTGGTC
GGTGTGCCGC GGGCGTTGCA GATGATGATG CTGGGCGAAA AGATCGGCGC CGATCAGGCC
GCCGACTGGG GCATGATCTA CAAATGCGTC GACGATGCCG CGTTGATGGC CGAGGCCAAG
ACGCTGGCCG CACGCCTCGC CAATGGTCCG ACGATCGCAC TCGGCACGAT GCGCAAGCTG
TTGCGCGATG GACTGTCGCA GGATTTCGCG ACCACGCTCG ACGCCGAAGC CAGGGGCCAG
TTCATCGCGG GCGACAGCGC CGACGCGATG GAGGGCATCA TGGCCTTTCA GCAGAAGCGC
AAGACCGAGT TCAGAGGGAA ATAG
 
Protein sequence
MTDLPAFDTI RLDFADAVAT ITLNRPDRLN SMPPEMADEI RAALDHLPAL GARALLITGE 
GRGFCSGADL AGDRSGGAVG GGARSRNALR GHYNPMLLAL ANLDIPVVVA VNGPAAGVGC
SFALSGDFTI AGKSAYFLQA FVNIGLVPDG GSSWLLPRLV GVPRALQMMM LGEKIGADQA
ADWGMIYKCV DDAALMAEAK TLAARLANGP TIALGTMRKL LRDGLSQDFA TTLDAEARGQ
FIAGDSADAM EGIMAFQQKR KTEFRGK