| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1477 |
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| Symbol | pdxA |
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| ID | 4081249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1537070 |
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| End bp | 1538089 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638009842 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_616523 |
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| Protein GI | 103486962 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.771179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG ACGACCATCG GCGTCCGATC GCGGTCACCA TGGGCGACCC GGCGGGCGTT
GGCCCCGAAG TTACCGCCCG CGCCTGGGCC GCACGCCACG AGCATGATCT GCCGCCCTTC
GTCGCCATCG GCGACATCGC CGCGGTCGAG GCCGTCTGGG ACGGGCCGAT CGCGCGAGTC
GGCGACATGG CCGAAGTCGG GCGCGCCTTT GCCGCCGCAC TGCCCGTCTG GCACCTCGAG
GACAGCGGCC CGCTGACCCC CGGATCGCCG ACTCCCGCCG GCGCGACCTG CGCGCTCCAC
GCGCTCGAAA CGGGCATCGG ATTGACGCGC AACCAGGCGA GCGCCGCGCT CGTCACCGGA
TCGGTGTCGA AACATGCGCT GCACGGCATC GGCTATACGC ACCCCGGCCA GACCGAGTTC
ATCGCCGAAC GCTGCGGCGT CACCGCGACC AATGCGGTGA TGATGCTCGC GGGACCGTCG
CTGCGCGTCG TGCCGCTTAC CGTGCATATC CCGCTTTCCG AAGTGCCCGA ACGGCTGACG
AGCGAGTTGA TCGTCGCCAA GGCGCGGATC GTCGCGCGCG GGTTGCGCCG CGACTTCGGC
ATCGCAACGC CGCGGATCGC GCTCGCCGGC CTCAACCCCC ATGCCGGGGA GAGTGGCCAA
TTGGGCGACG AGGAACTCCG CGTCATGCAA CCCGCCGTCG CGCAGCTCAG AGAGCAGGGC
CTCACGGTCG ACGGTCCGGT CGCCGCCGAC GCGCTTTTCG CGCCGGGAAT CCGCGACCGC
TATGACGCGC TGCTCTGCGC CTATCACGAT CAGGCGCTCG CGCCGTTCAA GGCGCTGCAT
TTCCACGACG GCGTCAATCT GACGTTGGGG CTGCCAATCG TCCGTACTTC GCCCGACCAT
GGCACGGCGT TCAATATCGC GGGCACCGGC CGCGCCGATC CCGGTCCGAC GATTGCCGCG
ATCGCGATGG CCGCGCGCAT GGCCGCGGCG CGCGAACGCA GCTGCGCGCC GGCAAAGTGA
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| Protein sequence | MQADDHRRPI AVTMGDPAGV GPEVTARAWA ARHEHDLPPF VAIGDIAAVE AVWDGPIARV
GDMAEVGRAF AAALPVWHLE DSGPLTPGSP TPAGATCALH ALETGIGLTR NQASAALVTG
SVSKHALHGI GYTHPGQTEF IAERCGVTAT NAVMMLAGPS LRVVPLTVHI PLSEVPERLT
SELIVAKARI VARGLRRDFG IATPRIALAG LNPHAGESGQ LGDEELRVMQ PAVAQLREQG
LTVDGPVAAD ALFAPGIRDR YDALLCAYHD QALAPFKALH FHDGVNLTLG LPIVRTSPDH
GTAFNIAGTG RADPGPTIAA IAMAARMAAA RERSCAPAK
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