Gene Sala_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1476 
Symbol 
ID4081248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1535730 
End bp1537070 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content63% 
IMG OID638009841 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_616522 
Protein GI103486961 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.797114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAT TTTCGACCAT GACCGGCCTG ATCGCGCTGG CGGCCGCCGG TGTAACCCCG 
GTGCTCGCAC AGACCGTTGC CGATGCCGAA GTGCCCACGA CCAGCCTGAA CATCCCGGGC
AATGTCCAGC TTTATGGTGA CAATAAACCC AATGTCTATC GCCCCTCGGC GACGGTGAAT
GGCGAGATCA TCACTGCGAC CGACATCGAA CAGCGCATGG CGCTGATCCG GATCGCCAAC
AACAATGTCG AGTTGCCGCC CGAAGAGGAG CAGCGCCTGC GCAATCAGGT ATTCAGCAAC
CTGATCGACG AAAAGCTGCA GATTCAGGAA GCGCGCGCCG CCGACATCAC CATCGACGAA
AATGTCGTGA ACGAGCAGTT CGCGCGTCTC GCCGCCCGCT TCAAGCAGAC GCCCGAACAA
TTCGCCGCCT ATCTGGCGTC AAAGGGGTCC TCGGCGGCGG CGGTGAAACA GCAGATCCGC
GGCGAGTTTG CCTGGGACCG TCTGCTGTCG CGCAACATCC AGTCGACGAC CAATGTGTCG
ACCGAAGAAG TCGATCTTAT CGTCAAACAG ATGGAAGCCG CCAAGGGGCA GGACGAGTTT
CACCTCGGCG AAATCTATCT GTCGGCGACG CCCGACAATA TCGCCGCAGT TACCGAAAAT
GCGCGCAAGA TCATTCAGGC GCTGCAGGCG GGGGGCAGCT TTGCCGCCTA TGCGCGCCAG
TTTTCGGAAG CATCCACGGC GGTCGTCGGG GGCGATCTTG GCTGGGTGAA GGGCGCGCAG
CTTCCGGCTT CGATGGCCGA AGCCGCGATG CAGATGCAGC CCGGCCAACT GGTCGGGCCG
ATCGAGGTGC CCGGCGGCAT TTCGATCATG CTGCTGATCG ACCGACGACA GGTGCTGACC
GCCGACCCGC GCGACGCCAT ACTCAGCCTG AAGCAGATTT CGCTCGACTT CCCGGCCGGG
ACGACGGAGG CGCAGGCGTC TCAACTTGCG AGCCGCTTTG CGCAGGCGAC GCGCACGATC
GCCGGTTGTG GTGCGGCCGA CGCCGTCGCC GAACAATTGG GGGCCAGTGT CGTGTCGCGC
GACAATATCG CGATGCGCGC GTTGCCGGCA CCGTTGCAGG CCACGCTCGT CGATCTGCAG
GTCGGGCAGA CGACGCAGCC GTTCGGCGCC GCGAACGAAG GCATCAGCGT GCTGGTGCTG
TGCGGCCGCG ACATGCCCGA GACGGCAACC GCACCCAATC TCGAACAGAT TGAGCAGAAG
CTGCTGGAAG AAAAGGTCAA CAAGCGCGCC CAGCGTTATC TGCGCGACCT GCGCCGCGAC
GCGGTGATCG AATATAGCTG A
 
Protein sequence
MTRFSTMTGL IALAAAGVTP VLAQTVADAE VPTTSLNIPG NVQLYGDNKP NVYRPSATVN 
GEIITATDIE QRMALIRIAN NNVELPPEEE QRLRNQVFSN LIDEKLQIQE ARAADITIDE
NVVNEQFARL AARFKQTPEQ FAAYLASKGS SAAAVKQQIR GEFAWDRLLS RNIQSTTNVS
TEEVDLIVKQ MEAAKGQDEF HLGEIYLSAT PDNIAAVTEN ARKIIQALQA GGSFAAYARQ
FSEASTAVVG GDLGWVKGAQ LPASMAEAAM QMQPGQLVGP IEVPGGISIM LLIDRRQVLT
ADPRDAILSL KQISLDFPAG TTEAQASQLA SRFAQATRTI AGCGAADAVA EQLGASVVSR
DNIAMRALPA PLQATLVDLQ VGQTTQPFGA ANEGISVLVL CGRDMPETAT APNLEQIEQK
LLEEKVNKRA QRYLRDLRRD AVIEYS