Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1476 |
Symbol | |
ID | 4081248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1535730 |
End bp | 1537070 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009841 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_616522 |
Protein GI | 103486961 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.797114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAT TTTCGACCAT GACCGGCCTG ATCGCGCTGG CGGCCGCCGG TGTAACCCCG GTGCTCGCAC AGACCGTTGC CGATGCCGAA GTGCCCACGA CCAGCCTGAA CATCCCGGGC AATGTCCAGC TTTATGGTGA CAATAAACCC AATGTCTATC GCCCCTCGGC GACGGTGAAT GGCGAGATCA TCACTGCGAC CGACATCGAA CAGCGCATGG CGCTGATCCG GATCGCCAAC AACAATGTCG AGTTGCCGCC CGAAGAGGAG CAGCGCCTGC GCAATCAGGT ATTCAGCAAC CTGATCGACG AAAAGCTGCA GATTCAGGAA GCGCGCGCCG CCGACATCAC CATCGACGAA AATGTCGTGA ACGAGCAGTT CGCGCGTCTC GCCGCCCGCT TCAAGCAGAC GCCCGAACAA TTCGCCGCCT ATCTGGCGTC AAAGGGGTCC TCGGCGGCGG CGGTGAAACA GCAGATCCGC GGCGAGTTTG CCTGGGACCG TCTGCTGTCG CGCAACATCC AGTCGACGAC CAATGTGTCG ACCGAAGAAG TCGATCTTAT CGTCAAACAG ATGGAAGCCG CCAAGGGGCA GGACGAGTTT CACCTCGGCG AAATCTATCT GTCGGCGACG CCCGACAATA TCGCCGCAGT TACCGAAAAT GCGCGCAAGA TCATTCAGGC GCTGCAGGCG GGGGGCAGCT TTGCCGCCTA TGCGCGCCAG TTTTCGGAAG CATCCACGGC GGTCGTCGGG GGCGATCTTG GCTGGGTGAA GGGCGCGCAG CTTCCGGCTT CGATGGCCGA AGCCGCGATG CAGATGCAGC CCGGCCAACT GGTCGGGCCG ATCGAGGTGC CCGGCGGCAT TTCGATCATG CTGCTGATCG ACCGACGACA GGTGCTGACC GCCGACCCGC GCGACGCCAT ACTCAGCCTG AAGCAGATTT CGCTCGACTT CCCGGCCGGG ACGACGGAGG CGCAGGCGTC TCAACTTGCG AGCCGCTTTG CGCAGGCGAC GCGCACGATC GCCGGTTGTG GTGCGGCCGA CGCCGTCGCC GAACAATTGG GGGCCAGTGT CGTGTCGCGC GACAATATCG CGATGCGCGC GTTGCCGGCA CCGTTGCAGG CCACGCTCGT CGATCTGCAG GTCGGGCAGA CGACGCAGCC GTTCGGCGCC GCGAACGAAG GCATCAGCGT GCTGGTGCTG TGCGGCCGCG ACATGCCCGA GACGGCAACC GCACCCAATC TCGAACAGAT TGAGCAGAAG CTGCTGGAAG AAAAGGTCAA CAAGCGCGCC CAGCGTTATC TGCGCGACCT GCGCCGCGAC GCGGTGATCG AATATAGCTG A
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Protein sequence | MTRFSTMTGL IALAAAGVTP VLAQTVADAE VPTTSLNIPG NVQLYGDNKP NVYRPSATVN GEIITATDIE QRMALIRIAN NNVELPPEEE QRLRNQVFSN LIDEKLQIQE ARAADITIDE NVVNEQFARL AARFKQTPEQ FAAYLASKGS SAAAVKQQIR GEFAWDRLLS RNIQSTTNVS TEEVDLIVKQ MEAAKGQDEF HLGEIYLSAT PDNIAAVTEN ARKIIQALQA GGSFAAYARQ FSEASTAVVG GDLGWVKGAQ LPASMAEAAM QMQPGQLVGP IEVPGGISIM LLIDRRQVLT ADPRDAILSL KQISLDFPAG TTEAQASQLA SRFAQATRTI AGCGAADAVA EQLGASVVSR DNIAMRALPA PLQATLVDLQ VGQTTQPFGA ANEGISVLVL CGRDMPETAT APNLEQIEQK LLEEKVNKRA QRYLRDLRRD AVIEYS
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