| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1467 |
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| Symbol | |
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| ID | 4081278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1524787 |
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| End bp | 1526484 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009832 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_616513 |
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| Protein GI | 103486952 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGC CCCGGCGCTT CGTACCCTCG CTTTGGCTGC TGTACAGCTC GATGCTGCTC
GCAGCGCCGG TTGCGGCGCA AACGCCCGCC TATGACGTGA TCATTCGCGG CGGGACAATC
TACGACGGGT CGGGCAAGGC GCCCATCGTG GGCGACGTCG CGATCAAGGG CGACCGGATC
GTCGCCGTCG GAACGGTCGG AGGCGATGCG AAAAGCGAAG TGTCGGCCAG GGGCATGGCG
GTCGCGCCGG GTTTCATCAA CATGCTGAGC TGGGCAACCG AATCGCTGAT CGCCGACCCG
AAAAGCCAGA GCGACATCCG CCAGGGCGTG ACGCTGGAAG TGATGGGCGA AGGCTGGTCG
ATGGGGCCGA TGAACGCGGC GATGAAGGCG CAGGAGACAG CGCGACAGGG CGACATCAAA
TATGCGATCG AGTGGACGAA CCTGGGCGAC TATTTGGGCT GGCTCGAAAA GCGCGGCATT
TCGACCAATG TGGCGAGCTT CGTCGGCGCC GCGACGGTGC GCGTTCATGA ACTGGGCGAA
GGCGACGTCG ACCCGACGCC CGATCAGCTG GACCGGATGC GCGCGCTGGT GCGGCAGGCC
ATGAACGAAG GCGCGATGGG CGTCGGCAGT TCGCTCATCT ATGCCCCCGG CTCCTACGCC
GAAACCGACG AATTGGTCGC ATTGACCAGC GAGGCGGCGA AATGCGGCGG CATGTATATC
AGCCATATGC GTTCCGAAGG CGACCGGATC GAGGAGGCGG TCGATGAGCT GATCGAGATT
TCGCGCCGGT CGGGCGCGCC CGCGGAAATC TATCACCTCA AAATGGCGGG GCGCAGCAAT
TGGGACAAGC TCGACACCAT CGTGAAGAAA ATCGAGGATG CGCGCGGCGA AGGGCTGCGC
ATCACGACCG ACATGTACAC TTACACCGCG GGCGCCACCG GGCTCGACGC CGCGATGCCG
ACCTGGGTGC AGGCGGGCGG GCTGGAGCAA TGGATCGAGC GGCTGAAAGA CCCCGCAATC
CGCGCGCGCG TTGCCGAGGA AATGAAAAAG CCGGGCAGGG ACTGGGAAAA CCTCTATTAC
GGCGCGGGCG CCGACAAGAT GATCCTGTCG GGATTCAAGA ATGACGCGCT GAAGCCGCTC
ACCGGCAAGA CGCTCGCCGA AGTCGCTGCG ATGCGCGGCA AGTCGCCCGA AGAGACGGCG
ATGGACCTGG TCATCGAGGA CGGCTCGCGC GTCGGCACCG TCTATTTCCT GATGTCCGAG
GATAATGTCC GCAGGCAGAT CCAGCTCCCG TGGATGAGCT TCGGCTCCGA CGCGGCATCG
CAGGCGACCG AGGGCATTTT CCTGAAATCG GGCGCCCACC CGCGCACCTA TGGCAATTTC
GCGCGTCTGC TCGGTCGCTA TGTCCGCGAT GAAGAGCTGA TCCCGCTCGA ACAGGCGGTG
TACCGGCTCA CAACCCTGCC CGCGACCAAT CTGGGCCTTC CCGATCGCGG TGCCCTGAAA
CCCGGCTATT ATGCCGATGT CGTCGTGTTC GATCCCGCGA CGGTCGCCGA CCGTTCGACC
TTCGAGCAAC CGCATCGATA TTCGGTCGGC GTGCGCGATG TGTTCGTGAA CGGCACACAG
GTGCTGAAAG ATGGCGAGCA TAGCGGGGCG ACGCCGGGAC GCGCGGTGCG CGGGCGTGGC
TGGAACCGCT GCCCCTAG
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| Protein sequence | MASPRRFVPS LWLLYSSMLL AAPVAAQTPA YDVIIRGGTI YDGSGKAPIV GDVAIKGDRI
VAVGTVGGDA KSEVSARGMA VAPGFINMLS WATESLIADP KSQSDIRQGV TLEVMGEGWS
MGPMNAAMKA QETARQGDIK YAIEWTNLGD YLGWLEKRGI STNVASFVGA ATVRVHELGE
GDVDPTPDQL DRMRALVRQA MNEGAMGVGS SLIYAPGSYA ETDELVALTS EAAKCGGMYI
SHMRSEGDRI EEAVDELIEI SRRSGAPAEI YHLKMAGRSN WDKLDTIVKK IEDARGEGLR
ITTDMYTYTA GATGLDAAMP TWVQAGGLEQ WIERLKDPAI RARVAEEMKK PGRDWENLYY
GAGADKMILS GFKNDALKPL TGKTLAEVAA MRGKSPEETA MDLVIEDGSR VGTVYFLMSE
DNVRRQIQLP WMSFGSDAAS QATEGIFLKS GAHPRTYGNF ARLLGRYVRD EELIPLEQAV
YRLTTLPATN LGLPDRGALK PGYYADVVVF DPATVADRST FEQPHRYSVG VRDVFVNGTQ
VLKDGEHSGA TPGRAVRGRG WNRCP
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