| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1465 |
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| Symbol | |
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| ID | 4081276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1522028 |
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| End bp | 1524001 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009830 |
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| Product | beta-lactamase |
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| Protein accession | YP_616511 |
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| Protein GI | 103486950 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.16455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCA TCCGCAAGAT GATGATCGGA CTCACGGCAT TGGCCGCGCT GCCTTTGGCG
GCGCAAGGCC CTGTGCCCGC ACCGGCCGTG AAGAAGGCCG AAGCCATGGC GCCGAAGGCG
GCGTCGGCGC CCGCCGCGCT CGACGCAAAG GATCTCGAGG CGTGGATGGA CGGCTTTCTG
CCCTATGCGC TCGAACGCGG ACGCATTGCT GGCGCGGTCG TGGTCGTCGT TCGTGGCGAC
GAGGTTCTGC TCCAGAAGGG CTATGGTTTT GCGGACGTCG CGAAACGCGC GCCGGTGCTC
CCCGAAACGA CGCTTTTCCG ACCCGGATCG GTGTCCAAGC TGATCACCTG GACGGCGGTG
ATGCAGCAGG TCGAGGCGGG CAAGATCGAT CTCGACAGGG ACGTCAACGC CTATCTCGAT
TTCAGGATTC CGCCCTTTGA GGGCAAGCCG ATCACGATGC GCCACATCAT GACGCACACG
GCAGGCTTCG AGGAATCGGT GCGCCACCTG ATCAGCAGCG ATCCCGAGGC GGTGAAGACA
CTGAAAGAGC TGATGCCGCT CGCGCTGCCC GAACGGGTGT TCGCGCCCGG TACGACGCCC
GCCTATTCCA ATTATGCGAC GGCGCTCGCG GGGTATATCG TCGAGCGCGT GAGCGGGCAG
GGGTTTGACG ATTATGTCGA GAACCGGATC TTCAAGCCGC TCGGCATGAC GCATTCGACC
TTTCGCCAGC CGCTGCCCGC GCGCCTCGCG CCGCATATGG CAAAGGGCTA TGCCGACGTT
ACCGGCAAGC CGCAGCCCTT TGAAATGGTC ATCCCCGCTC CGGCGGGTGC CATGTCGGCG
AGCGGCGCCG ACATGGCGAA GTTCATGATC GCGCACCTGA ACGGTGGCGG CGGGATACTG
AAACCCGAAA CCGCCCGGCA GATGCACGAT TTCAAGGCCG CCGGCGTCGG CCCGCTCAAC
AGCATGGCGC TCGGTTTCTA CGAACAATGG GTCAATGGAC GCCGCGCGAT CGCGCACGGT
GGCGATACCG TCTGGTTCCA CTCCTATCTC TGGCTGTTCC CCGAATCCGA CATCGGCATT
TTCCTGTCGA TGAATGCGCA GGGCAGGGAT GGGGCAACGG GCGCGGTGCG CAGCGCGCTG
TTTCACAAGT TCGCCGACCG CTATCTGCCG GGGCCGCCCG AAAAACCGTC GCAGGTCGAT
GCCGCGACCG CCCGCGACCA TGCAAGGATG ATGGTCGGCA ATTATGTCAG CAGCCGCGGC
TCCTTCACCA ATTTCTTCAG CCTCTTCGGT CTGCTGGGTC TGGCAACGAT CTCGCTGACC
GAGGACGGCA AGATCAGCGT TCCGGCGCTC GATGGCCTGG GTGCCGGCGC CCGCGACTGG
GTGGAGGTCG AACCCTTCGT TTGGCGCGAC AGCGGCACGG GTGAACGGCT TGCCGCCGAG
GTCAGCGACG GTCGCGTCGT GCGCTGGAGC GTCGACCCCG GATCGCCCTT CATGGTCTTT
GAACCCGCAC CTTTCGGCGT CAACGCTGCG TGGCTCAACC CCGCGCTGAT CTTCGCCTTC
GGGATCATCC TGCTGACGGC GCTCGCCTGG CCGGTGCGCG CGCTGGTGCG GCGCCGCTTC
AAGGCGGATT TCGCGCTCAC CGGCAAATCG CTCCGCGCCT ATCGCCTGTC GCGCGCCTTC
GCTTGGCTCG TGCTCGCGGC GGCGGCGGGG TGGATTGCGC TGATCGCCGC CTTTACGGCC
GACATCGGCA GCATCGGCGG CCCGCTCGAC TGGCTCATCC ATCTGCTACG CGTCCTGACC
CCTCTGGCCG CCTTCGGCTT GCTGGCGACG GGCGGCTGGC ACCTGTGGTT TTCGATCAAG
GACAAGCGGC GCTGGACAAT GAAGCTCGGC GCGGTGCTGC TGATCCTCGC CGCCGCGGTG
CTTGTCTGGG TGACACTCGC CTTTCATCTC TATGGCTTCG GGATGGTCTA TTGA
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| Protein sequence | MRFIRKMMIG LTALAALPLA AQGPVPAPAV KKAEAMAPKA ASAPAALDAK DLEAWMDGFL
PYALERGRIA GAVVVVVRGD EVLLQKGYGF ADVAKRAPVL PETTLFRPGS VSKLITWTAV
MQQVEAGKID LDRDVNAYLD FRIPPFEGKP ITMRHIMTHT AGFEESVRHL ISSDPEAVKT
LKELMPLALP ERVFAPGTTP AYSNYATALA GYIVERVSGQ GFDDYVENRI FKPLGMTHST
FRQPLPARLA PHMAKGYADV TGKPQPFEMV IPAPAGAMSA SGADMAKFMI AHLNGGGGIL
KPETARQMHD FKAAGVGPLN SMALGFYEQW VNGRRAIAHG GDTVWFHSYL WLFPESDIGI
FLSMNAQGRD GATGAVRSAL FHKFADRYLP GPPEKPSQVD AATARDHARM MVGNYVSSRG
SFTNFFSLFG LLGLATISLT EDGKISVPAL DGLGAGARDW VEVEPFVWRD SGTGERLAAE
VSDGRVVRWS VDPGSPFMVF EPAPFGVNAA WLNPALIFAF GIILLTALAW PVRALVRRRF
KADFALTGKS LRAYRLSRAF AWLVLAAAAG WIALIAAFTA DIGSIGGPLD WLIHLLRVLT
PLAAFGLLAT GGWHLWFSIK DKRRWTMKLG AVLLILAAAV LVWVTLAFHL YGFGMVY
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