| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1463 |
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| Symbol | |
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| ID | 4081274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1518329 |
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| End bp | 1520797 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638009828 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_616509 |
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| Protein GI | 103486948 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000224426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTGC GGCGGCGCCG ACGAAGGCCT GTTTGCGCCG CGCGGTCGAT CCCGCGGCCC
GAACATGCCG TGCTGAAACG CGCGTACCGC GCGTACAGGG ACAGCTACGC CTTTCGCGAC
AAGATCGCCA TCGACGGTTT CGACTATCCT TTGAAGTCCT TCGACCCCGT CGAGGAACTC
ATTCGCCGCA ACTACCGAAC GACAATATCC GGGCCGTGCT CGGTGGCAAT GTCCGCTGCC
TGCTCGCCCA ACTCTGGGGG TAAGACCATG AACAAGGGAT TTTTTGGCGC AGCAAGCCTG
GCCGCGATGG CCGTTGCGAT GCCGGCTTAT GCCGAAGAAG CGAGCAGCGA CGAACGTGAC
ATCGTCGTGA CGGCGCAAAA GCGCGAAGAG CGATTGATCG ACGTGCCGCA ATCGGTCAGT
GTCGTATCCG GCGAAGCGCT GGAAAACATT CAGGCAACCA ATTTCTCGGA TTATCTGAAA
CTCGTCCCCG GCCTGCAACT CAATCAGGCG ACGCCGGGTT TCGGTCGCCT CGTATTGCGC
GGTGTCAACA CCGGCGGCGT CGCCTCGACG GTTGCCGTCT ATCAGGACGA AACGACCTTT
GGGTCGAGCA GCGGTCTGGT CAACGGCGCG ATCCTGGCGG GTGACTTCGA CACGTTCGAC
ATTGAACGGA TCGAGGTGCT GCGAGGACCG CAGGGCACGA TCTATGGCTC AAGCTCGATG
GGCGGTGTTC TCAAATATGT GACAAACAAG CCCGACACCT CGGCCTTTGA GGTTCGCGCA
CGCGGCAGCG TTGAAACGAC GACCGGGGGC GATGAATCAT ATCTTGGCAG TGCGGTTGTC
AATCTGCCTC TTGGCGAAAC CCTCGCGCTC CGCGCGTCGG GCTTTTATCG TGATTTCGGC
GGTTTCATCG ACTCTATCGG AACCGGCGGC GCGGATATCG AGTCCGACAT CAACAGTTCG
AAAAGCTATG GCGGCCGCGC CTCGGTGCTG TTCAAGCCGA GCGAGACATT CTCGATTCAA
CTTGCCGCCT ATCTTCAGAA CCTGGAGACC GATGCCTCGA ACAGCGTGGA CAGCGATCCA
TCGACGGGTC GCACGCTATA CGGGCGCCTG TCGCAATCGC AATTCGTGCC CGAGTTCACC
GATGTGCGCT ATCGCGTCTA CAGCGGGGTG GTCGATGCCG ATCTCGGCTT TGCGAACCTC
GTGTCGGCGA CCAGCTACAG CACCTTGTCG CAATCGTTTC GCGGCGATCT TACGACGCAG
TTCGGCGCAT TGATCGAAGC GGTGTTTGGA ACGCCCAACG ACTTTTTCCA GGGGCAGCTG
ACGCGGGTGA AGCGCTTTAC GCAGGAAGTG CGCCTGCAAT CGCCTGAAAG CGACCGTTTC
GAATGGCTCA TTGGAGTCTA TTATACCCGC GAACGGGGCC TAATTGACCA GGATTTCAAC
GCCGTCGAGC CGGGCACGCT CACCCCGATC GCCGGGTTGC CGCTGCTGGG CGTCGCGACG
ATCAACTCGC GCTATCGCGA ACTCGCAGGC TTCGCCAACG CCACGATCCA TTTCGGCGAC
CGTTTCAACC TCAGTTTCGG GGGGCGTTAC AGTGGCAACA AGCAATCCGC CGTCCAGGTG
TCCGACGGCG TCCTCGCGGG CGGACCCAAT GCTTTGCCCA AGGCGCGCTC GTCCGAAGAC
GTCTTCACTT TCTCGGTCGC CCCGCAGTTC GAGGTTAGTG ACAACGTGAC CATCTATGCG
CGCGTTGCGA AGGGTTTCCG TCCCGGTGGG CCGAACGTGC TGGCGCCGGG GGCGCCGCCG
GAAATCGCCA CCTATGGCTC GGACTCGCTG ATCAGTTACG AGCTTGGCCT CAAGGCGGAA
ACGGTCGATC GAACCTTCTC CATCGATATC GCGGCCTTCC ACATCGACTG GAAGGACATT
CAGGTGTTCG GACAGGTCAA CGATTTCGGT GTCAACTTCA ATGGCGGCAA GGCCAAGAGC
GATGGCGTGG AGTTCACGAC GACGCTGCGT CCCGCACAGG GGCTTAGCTT CTCGCTCAAC
GGCGCGTGGA CCAACGCGAA GCTGAAGGAC GATACGCCGC CGCTGGTCGG CGGCTTGTCG
GGTGATCGCC TGCCATATAC CCCTGAATTC AGTATCGGCG CGAACGCCGA TTATGAATGG
GAACTCGGCG GCGATACCAC GGCTTATGTC GGCGCATCGG TGCGCAGCCT GTCGAAACAA
CCGGCGGGCT ATGACCTTGC CTTTCGTATC GCCAATGGGC GCCAACGCTA TCTGCCGGCC
TATGAAGTGG TCGATCTGCG TGCGGGGGTT GATTTCGGAC GATATTCGAT CGAGCTTTAT
GCAAAGAATC TGACTGACAG CGAAGGCAAG ACGTCGCTGG AGGCGCCGGC AAACATCCCG
TTCGGCGCTG CCGGAACCGG AGTTATCCGG CCACGGACGA TCGGTGCTAC CCTGACCGCC
GGCTTTTGA
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| Protein sequence | MPLRRRRRRP VCAARSIPRP EHAVLKRAYR AYRDSYAFRD KIAIDGFDYP LKSFDPVEEL
IRRNYRTTIS GPCSVAMSAA CSPNSGGKTM NKGFFGAASL AAMAVAMPAY AEEASSDERD
IVVTAQKREE RLIDVPQSVS VVSGEALENI QATNFSDYLK LVPGLQLNQA TPGFGRLVLR
GVNTGGVAST VAVYQDETTF GSSSGLVNGA ILAGDFDTFD IERIEVLRGP QGTIYGSSSM
GGVLKYVTNK PDTSAFEVRA RGSVETTTGG DESYLGSAVV NLPLGETLAL RASGFYRDFG
GFIDSIGTGG ADIESDINSS KSYGGRASVL FKPSETFSIQ LAAYLQNLET DASNSVDSDP
STGRTLYGRL SQSQFVPEFT DVRYRVYSGV VDADLGFANL VSATSYSTLS QSFRGDLTTQ
FGALIEAVFG TPNDFFQGQL TRVKRFTQEV RLQSPESDRF EWLIGVYYTR ERGLIDQDFN
AVEPGTLTPI AGLPLLGVAT INSRYRELAG FANATIHFGD RFNLSFGGRY SGNKQSAVQV
SDGVLAGGPN ALPKARSSED VFTFSVAPQF EVSDNVTIYA RVAKGFRPGG PNVLAPGAPP
EIATYGSDSL ISYELGLKAE TVDRTFSIDI AAFHIDWKDI QVFGQVNDFG VNFNGGKAKS
DGVEFTTTLR PAQGLSFSLN GAWTNAKLKD DTPPLVGGLS GDRLPYTPEF SIGANADYEW
ELGGDTTAYV GASVRSLSKQ PAGYDLAFRI ANGRQRYLPA YEVVDLRAGV DFGRYSIELY
AKNLTDSEGK TSLEAPANIP FGAAGTGVIR PRTIGATLTA GF
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