Gene Sala_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1462 
Symbol 
ID4081273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1517268 
End bp1518308 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID638009827 
Producthypothetical protein 
Protein accessionYP_616508 
Protein GI103486947 
COG category[S] Function unknown 
COG ID[COG3367] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0204992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CCATCGGCAG GCTGGCCGAC AGCCTGACCC TGCCGCAACC CTATCTGCTC 
TTCCTCGGCG ATACGACCGA GGCGGGCTAT GCCAAGACTG CCTTTGGCCT CGCCGACTGG
GCGGCCGATC GCTGCGTCGG CGAACTCGGG GTCGCGGGCT GCACCGTCAG CGCGGGTCTG
CCGCGGCTGT CGCCCGCCGA AGCGCGCGCG GCGGGCGCCC GCTCGCTGGT GATCGGCGTT
GCCAACCAGG GCGGCGTGAT TAGCGAGAGC TGGGTTGCGG CGCTGGTCGA GGCGATGGAG
GCAGGGCTCG ACATCATCAG CGGGCTGCAC ACGCGGCTGA CCAGCGTTCC CGCGCTGGTG
GAGGCGTCGC GGCACACCGG CCAGCGGCTT ATCGACGTCC GCACCCCGCC GCCCTCGATC
CCGATCGGCA ACGGCCGCAA GCGCAGCGGC AAGAGACTGC TCACCGTCGG CACCGATTGC
GCGCTCGGCA AGAAATATAC CGCGCTTGCG TTGCACCGCG CCTTTGTCGC GCGCGGGATC
GACGCCGATT TCCGCGCGAC GGGGCAGACG GGGATCATGA TCGCGGGCGG CGGTATTCCC
ATGGACGCGG TCGTGTCGGA CTTCGAGGCG GGCGCGGCGG AGATTTTGAG CCCCGATGCG
CCCGACGATC ATTGGGATCT GATCGAAGGG CAGGGGTCGA TCTTCAACCC CGCCTATGCC
GCGGTGTCGC TCGGCCTGCT CCACGGCAGC CAGCCCGACG TCTTCGTCGT TTGCCACGAT
CCCAGCCGCA GGGTCATCCT CGGCATGGAA AGCTTTGCGC TTCCCAGCAT TGAGGAAGTG
ATCGACCTGA CGATCCGGCT CGGCAGCCGG ACCAATCCGG CGATCCGCTG CGGCGGGGTC
AGCCTCAATA CGTCGAGCAT GGGGGTGGGC GAGGCCGAGG CGCTGATCGG CGCCGAAAGG
CGCCGCCTCG GGCTGCCCGT CGCCGACCCG ATCCGCGGCG GCGCCGCCTT CGACGCGCTC
GTCGAAAATT GTCTCGCATG A
 
Protein sequence
MNAPIGRLAD SLTLPQPYLL FLGDTTEAGY AKTAFGLADW AADRCVGELG VAGCTVSAGL 
PRLSPAEARA AGARSLVIGV ANQGGVISES WVAALVEAME AGLDIISGLH TRLTSVPALV
EASRHTGQRL IDVRTPPPSI PIGNGRKRSG KRLLTVGTDC ALGKKYTALA LHRAFVARGI
DADFRATGQT GIMIAGGGIP MDAVVSDFEA GAAEILSPDA PDDHWDLIEG QGSIFNPAYA
AVSLGLLHGS QPDVFVVCHD PSRRVILGME SFALPSIEEV IDLTIRLGSR TNPAIRCGGV
SLNTSSMGVG EAEALIGAER RRLGLPVADP IRGGAAFDAL VENCLA