| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1458 |
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| Symbol | |
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| ID | 4081269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1511965 |
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| End bp | 1513302 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009823 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_616504 |
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| Protein GI | 103486943 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.47036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCT TCACCGCCGA GCAGACGATC CTTTTCGTCG ACGACGATGC CGCACTGCGC
GAAGCGAATG CGCAGACGCT CGACCTTGCG GGCCTTGCGG TCGAAACCTT CGCCGATGCG
CAGAGCGTGC TGCCGCGCAT CGCCGCTGAT TTCGCCGGGA TCGTCATCAC CGACATAAGG
ATGCCCGGCA TGGACGGGCT GGAACTGCGC GCCGCGATCC ATGCAATCGA CCCCGACATC
CCCGTCGTGC TGATCACCGG GCACGCCGAT GTGACGATGG CGGTGCGGGC GCTCCACGAC
GGGGCGTTCG ACTTTCTCGC CAAACCTTTT GCGGCGGACC ATCTGGTCGG CGTCGCGCGC
CGCGCGCTCG CGCATCGCGC GCTGATCCTC GACAACCGGC GCCTCACCGC GGCGGCGGCG
GCGATCGACA GTCCACTGAT CGGCGAAAGC CCGGCGATGG TCCGTCTGCG CGAAACGATC
GCGCAGCTGG CGCAGGCCGA CATCGACGTG CTGATCGAGG GCGAGACGGG GACGGGCAAG
GAACTGGTCG CGCATATGCT CCACCGCCAG AGTCGGCGGA GCGCGGCGTC GCTCGTCGCG
GTCAATTGCG CCGCTTTGCC GCACGACCTG GCCGAAGCCG AACTGTTCGG CAGCAACCTT
GTCGACCGCG CGACGGGCAA GCTGGGCCAG GCTGGGCGGA TCCGCGGCGC GCATCGCGGG
ACCTTGTTCC TCGACGAGAT CGACACGATG CACGCGGCGG TGCAGGCGAA GCTGCTGCGC
GTGATCGAGG AGCGCGAGGT GCAGCCATTG GGGGCGAGTG CGCCCGAACC CGTCGACCTG
CGCGTTGTCG CAGCGACCAA GACCGACCTG ATGGACGCGG TGCGTGCGGG GGATTTTCGC
GAAGACCTTT ATTACCGGCT GCACGTCGTC AAGCTGCGCC TTCCGCCCTT GCGCGAGCGT
CGCTCCGACA TCCCGCAGAC CTTTGCCTTC TTCCTCGACG AGGCGGCGTC GAAAATGGGG
CTGACGGGGT TCCAGATCGA CGACGCCACG CGTCGGCACC TGGTCGAACA TGACTGGCCG
GGCAACGTCC GCGAGCTCAA GAACTTCGCC TATAGCGTCG TGCTCGACCT GCCCTCCGAC
CCCGCGCGTT CGGCGATGCC GGCAGCCGCG CCGCTTGCCG AGCGGCTGCG CCGGTTCGAG
GCGACGATCA TCGAGGATAC GCTCGCCCAG ACGCGCGGCA ATATCGGCGA GACGATGGCG
CAGCTCGGCG TGCCGCGAAA GACGCTTTAC GACAAGATGG CCAAGCTGGG GATCGATCCG
AAGCGGTTTC GAGGCTGA
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| Protein sequence | MSFFTAEQTI LFVDDDAALR EANAQTLDLA GLAVETFADA QSVLPRIAAD FAGIVITDIR
MPGMDGLELR AAIHAIDPDI PVVLITGHAD VTMAVRALHD GAFDFLAKPF AADHLVGVAR
RALAHRALIL DNRRLTAAAA AIDSPLIGES PAMVRLRETI AQLAQADIDV LIEGETGTGK
ELVAHMLHRQ SRRSAASLVA VNCAALPHDL AEAELFGSNL VDRATGKLGQ AGRIRGAHRG
TLFLDEIDTM HAAVQAKLLR VIEEREVQPL GASAPEPVDL RVVAATKTDL MDAVRAGDFR
EDLYYRLHVV KLRLPPLRER RSDIPQTFAF FLDEAASKMG LTGFQIDDAT RRHLVEHDWP
GNVRELKNFA YSVVLDLPSD PARSAMPAAA PLAERLRRFE ATIIEDTLAQ TRGNIGETMA
QLGVPRKTLY DKMAKLGIDP KRFRG
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