| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1457 |
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| Symbol | |
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| ID | 4081268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1510112 |
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| End bp | 1511968 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009822 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_616503 |
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| Protein GI | 103486942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.798107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAAACA CCGCATACCA AATCATCAAA GTGTGCAACA ATCCGCACAT GATCGATTCG
CGCGATTCGT CCGTCATCGC TCCCGTGACC GGTCGCCGCC GGTTGCTGAT CGCGGTCGCG
GCGGGGCTGG CGATCCTGTT GCTCGCCGGA TTTGGTCTTG CCCATTGGGC CGCCGGGCGC
GCCGGGGCGC AAACGGCCGT CGAGGCGCAA CAGAATGCCC GCGCGCACGC GAGCCTGCTC
GAAAGCGAGT TGCAGAAGTT CCGCCTCCTG CCCCGCGTGC TTACCGAATT TCCCGATGTG
CGCGCGGCGC TCGCGGACAA GAGCGATGCG GCATCGCGTC GCCTTGACCG CGAGCTCGAA
CAGCTTGCGA CGCGCACCGA TGCCGCGGTG ATTTACGTTC TCGATGCCGA TGGCACGACC
ATCGCGGCGA GCAACTGGCA GTCGCCGACC AGCTTCGTCG GCGAGAATTA TCGTTTCCGT
CCCTATTTTC GGGACGCGAT GCAGCGCGGC GACGCCGAAC TGTTCGCGCT GGGGACGGTG
AGCGGACGCC CCGGCCTTTA CCTCGCACGG CGCGTCAACG CGGGCGGCGA CGCGGACGGG
CGGGCGCTCG GCGTGATCGT GCTCAAGGTC GAGTTCGACA AGCTCGAAAC GCGCTGGGCC
GACTCCGCCG CGACCACGCT CGTCACCGAC GCGGCGGGCA TCGTCGTGAT GAGCAGCGCG
CCGCGCTGGC GCTTCCGGTC TTTCGGTGCC TTGTCGGCGC GTGATCGTCA GCGGCTGCGC
GCGACGCGCA GCTATGGCGA CGCGCCGCTG GATCCGTTGC CGCTGCGCCG CACGGGAGAC
GTTCTCCGCA TCGGCGACCA GTCCTATTTT CAGGTGGCGG AGCGGGTGTC GCTGCCCGGC
AGCACGCTTC GCCTGCTCCA GCCCGCCGAA CCCGCACGCG CGAGCGCCAA TGCGACCGCG
CGCGTGATAT TCCTCATCCT CCTCATCCTG GTCGGCGCGG CGATCGTCAG CTTGCTCCGC
CTCGTCGAGC GGCAGGCGCT GCGACAGGCG GCGCATGAGG CGCTCGAACG CGAGGTTGCC
GCGCGCACGC GCGATCTGCG CGCCGCGAAC GACGAATTGC GGCAGGCATC CGAGCGGCAG
GCCGAAACCG ACCGTCGCTA TCGCGCCGCG CGCGAGGAGC TGGCGCAGGC CAGCCGCCTC
GGCTCGATCG GGCAGATCAC CGCCGGGGTC GCGCACGAGA TCAACCAGCC GGTCGCAGCG
ATCCGCAGCT TTGCCGAAAA TGCCCTCGCC TATCTGGGTC GGTCAGAGGG CGACAAGGCG
CGCGCCAATC TGGACCATAT CGTCGCGCTG ACCGCGCGCG TCGGCGCGAT CACCGGCGAG
TTGCGCAATT TTGCGCGCCG CGCGACCGCG CCGCTGGGGC CGGTGGCGTT GCAGTCAGCG
ATCGACGGCA CGCTGCTGCT GATCGGCGAC CGGCTGCGCG CGCAGGGCAT CGCGCTCGAT
GTCGAGTTGG CGAACCCGGC CGCGACCGTC CACGCCGACC GCGTCCGGCT GGAGCAAATC
CTGGTCAACC TCCTGCAAAA TGCCGCCGAT GCAGTGCGCG GCCTCGAAGG CGCCCGCATC
AGCCTGACCG CGCACGGCGG CGATCCGGTG GCGATCGATA TTTGCGACAA TGGGCCGGGC
GTGCCCGCCG ACCTGAAGCC ACAATTGTTC ACGCCCTTCG TCACCGGGCG CCCCGATGGG
CTGGGGCTGG GACTCGCGAT CGCGAGCGAC ATCGCCAAAG CGTTCGGCGG TACGCTCTCG
ATCATCCCCT CACCGCTCGG TGGTGCGGGG TTCCGCGTGA CGCTGAGGCC GGCATGA
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| Protein sequence | MRNTAYQIIK VCNNPHMIDS RDSSVIAPVT GRRRLLIAVA AGLAILLLAG FGLAHWAAGR
AGAQTAVEAQ QNARAHASLL ESELQKFRLL PRVLTEFPDV RAALADKSDA ASRRLDRELE
QLATRTDAAV IYVLDADGTT IAASNWQSPT SFVGENYRFR PYFRDAMQRG DAELFALGTV
SGRPGLYLAR RVNAGGDADG RALGVIVLKV EFDKLETRWA DSAATTLVTD AAGIVVMSSA
PRWRFRSFGA LSARDRQRLR ATRSYGDAPL DPLPLRRTGD VLRIGDQSYF QVAERVSLPG
STLRLLQPAE PARASANATA RVIFLILLIL VGAAIVSLLR LVERQALRQA AHEALEREVA
ARTRDLRAAN DELRQASERQ AETDRRYRAA REELAQASRL GSIGQITAGV AHEINQPVAA
IRSFAENALA YLGRSEGDKA RANLDHIVAL TARVGAITGE LRNFARRATA PLGPVALQSA
IDGTLLLIGD RLRAQGIALD VELANPAATV HADRVRLEQI LVNLLQNAAD AVRGLEGARI
SLTAHGGDPV AIDICDNGPG VPADLKPQLF TPFVTGRPDG LGLGLAIASD IAKAFGGTLS
IIPSPLGGAG FRVTLRPA
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