| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1451 |
|---|
| Symbol | |
|---|
| ID | 4081533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1500982 |
|---|
| End bp | 1502088 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638009816 |
|---|
| Product | DNA alkylation repair enzyme-like protein |
|---|
| Protein accession | YP_616497 |
|---|
| Protein GI | 103486936 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4335] DNA alkylation repair enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG AAACGCTGCT GCTAAAAAAT CTGCTGGGGC CGCAGGCCGT TGCGACGATC
GCCGACGCCG GGACTGCCGC GACGCCGCAT TTCGACCGCC CGACGTTCGT GCGCGCCGCG
TCGGAGGGCC TCGATGCGCT GTCGATCATG GAACGCGTGC GCCATATCGC CGATGCGCTG
CACGGCGCGC TGCCAGGCGA TTATGGCGCG ACGCTCGATG CGCTGCGCGC AATGGCACCG
CGACTGACGC ACGGCTTTCA GGCGATCGCG ATCACCGAAG TGGTGGCACG CCACGGCCTC
GACGATTTCG ATCGCTCAAT GGCTGCGCTT GCCGATCTGA CGCGCTTTGG TTCGGCCGAG
TTTGCGATCC GTCCGTTCCT GACCGCCGAT CCCGACCGCG CGCTGGCTAC GATGGGGCGC
TGGACGACGA GCGACGACGA GCATGTGCGC CGCCTTGCGA GCGAGGGCGC GCGGCCGCGG
CTGCCGTGGG CGGCGCGTGT CCCCGCGCTG AAGGTCGATC CGACGCGCGC CGCGCCGATC
CTCGAGGCGC TGAAGGCCGA CCCTGCCCCC TATGTCCGCA AATCGGTCGC GAACCATCTC
AACGATATTG CCAAGGACCG GCCGGGCTGG CTGGTCGAGC GCCTCGCGCA CTGGTCGCAG
GACGACGAAC GCACCGCATG GATCGTCCGC CACGCGCTGC GCACATTGAT CAAGAAGGGC
GACCCCGCCG CGCTCGCGCT GATCGGCGTC GGCCATGGCG CCGCAGTGAC ACTGCGCCGC
TTTGCTGTCG AACCGGCCAG CGTCCGCCTT GGCGACCGGA TCGCCATCAC CGTTGCGTTG
GCGTCGGAGT CACCCGACGA TCAGCCGTTG GTGGTCGACT ACCGCATCCA TTATGCCCGC
CCCGGCGGCA AGAGTGCGCC GAAGGTGTTC AAGCTCAAGA GCTTCACGCT CGCGGGGCAC
GATACCGCCG CGCTGTCGAT TTCACAGACG ATCCGCGATT TCACGACCCG CCGCCATCAT
CCAGGGCGGC ACCGGGTCGA ACTGATGGTC AATGGCCAGG CGATGGCGGA GGCCGCCTTC
GACATCGTTG CCGACGATGG CGCCTAG
|
|---|
| Protein sequence | MSGETLLLKN LLGPQAVATI ADAGTAATPH FDRPTFVRAA SEGLDALSIM ERVRHIADAL
HGALPGDYGA TLDALRAMAP RLTHGFQAIA ITEVVARHGL DDFDRSMAAL ADLTRFGSAE
FAIRPFLTAD PDRALATMGR WTTSDDEHVR RLASEGARPR LPWAARVPAL KVDPTRAAPI
LEALKADPAP YVRKSVANHL NDIAKDRPGW LVERLAHWSQ DDERTAWIVR HALRTLIKKG
DPAALALIGV GHGAAVTLRR FAVEPASVRL GDRIAITVAL ASESPDDQPL VVDYRIHYAR
PGGKSAPKVF KLKSFTLAGH DTAALSISQT IRDFTTRRHH PGRHRVELMV NGQAMAEAAF
DIVADDGA
|
|---|
| |