| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1441 |
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| Symbol | rplA |
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| ID | 4081523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1489863 |
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| End bp | 1490561 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009806 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_616487 |
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| Protein GI | 103486926 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0252476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC TGACCAAGAA GCAGAAGGCC CTTGAGGGCA AGGTCGACGC GCAGAAGCTG
CACGGCGTCG ACGAAGCGAT CAAGCTGGTG CGCGAGCTGG CGACCGCCAA GTTCGACGAA
ACGCTCGAAA TCGCGATGAA CCTGGGCGTC GATCCGCGCC ACGCCGACCA GATGGTCCGC
GGCGTCGTCA CGCTGCCCGC GGGGACCGGC AAGGACGTCA AGGTCGCCGT GTTCGCGCGC
GGCGACAATG CCGAGAAAGC ACTGGCCGCA GGCGCCGACA AGGTGGGCGC CGAAGACCTG
ATGGAAGACA TGCTTGCGGG CAACCTCGAC TATGGCCGCG TCATCGCGAC GCCCGACATG
ATGGGCATCG TCGGCCGCCT CGGCAAGACG CTGGGTCCGA AGGGCCTGAT GCCGAACCCG
AAGCTCGGCA CCGTCACCCC GAACGTCGCC GAAGCCGTGA AGGCCGCCAA GGGCGGTCAG
ATCGAGTTCC GTGTCGAAAA GGTCGGCATC ATCCACGCCG GCCTTGGCAA GCTGTCGTTC
GGCGAAGAAA AGCTGCGCCA GAACTTCGAC GCCTTCGTCG ACGCGATCGT CAAGGCGAAG
CCGGCCGGCG CCAAGGGCAA GTATGTCCGC AAGGTCGCGC TGTCGTCGTC GATGGGCCCC
GGCGTGAAGG TCGATACGGC CGAACTCACC GGCGCCTGA
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| Protein sequence | MAKLTKKQKA LEGKVDAQKL HGVDEAIKLV RELATAKFDE TLEIAMNLGV DPRHADQMVR
GVVTLPAGTG KDVKVAVFAR GDNAEKALAA GADKVGAEDL MEDMLAGNLD YGRVIATPDM
MGIVGRLGKT LGPKGLMPNP KLGTVTPNVA EAVKAAKGGQ IEFRVEKVGI IHAGLGKLSF
GEEKLRQNFD AFVDAIVKAK PAGAKGKYVR KVALSSSMGP GVKVDTAELT GA
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