Gene Sala_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1438 
Symbol 
ID4081520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1486410 
End bp1486889 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID638009803 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_616484 
Protein GI103486923 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.101708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACC ATAAAGACCA TGGCATCAAC ATCGATCCGG CCTTCGTGCG TGCGCTCGCC 
GAGCTGCTCG ACGACACGCA GCTGTCGGAG ATCGAGGTCG AGGACGGTGA TCGCAAGGTC
CGCGTCGCGC GCAACCTGAC CGCCGCAGCC GCACCCGTCG CCTACGCTCC GCCACCCGCA
GCGGCCGCAC CCGCCGCCGC AGTTCCGGCC ACGGCACCCG CCGCCGCGCC TGCTGTCGAC
AGCTTCGCCG ACGCGGTCAA GTCACCGATG GTCGGCACCG TCTATCTGGC CCCCGAACCC
GGCGCGCCCA ATTTCGCCAC CATCGGTTCG GAAGTGAAGG CGGGCGACAC GATCCTGATC
ATCGAGGCGA TGAAGGTGAT GAACCCGATC ACCGCGCCCG CCGCGGGCAC GCTCAAGGCC
GTGCATGTCG AAAACAGCCA GCCGGTCGAG TTCGACCAGC CGCTGTTCAC CATCGGGTAA
 
Protein sequence
MGDHKDHGIN IDPAFVRALA ELLDDTQLSE IEVEDGDRKV RVARNLTAAA APVAYAPPPA 
AAAPAAAVPA TAPAAAPAVD SFADAVKSPM VGTVYLAPEP GAPNFATIGS EVKAGDTILI
IEAMKVMNPI TAPAAGTLKA VHVENSQPVE FDQPLFTIG