| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1428 |
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| Symbol | |
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| ID | 4081745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1478702 |
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| End bp | 1479616 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009794 |
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| Product | rarD protein |
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| Protein accession | YP_616475 |
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| Protein GI | 103486914 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.242387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA CAGCAGCCCC CGCGGGGAGC GACCAGGGCG GCCTGCCCTT CGCGATCGCC
GCCTATGGCA TCTGGGGCTT CGTTCCGCTC TTCTTCAAAC TCGTCGACAG CGTCCCGCCG
GTCGAGGTGC TGACGCAGCG GATCATCTGG TCGCTGCCGC TCTGTTTCCT CATCATGCTT
TTTCGCCGCC AGATCGGCGA ATATCTGGCG GCGCTGAGGG ACTGGCGGAC GCTGCGCCTG
TTGCTCGCGA GCGCGCTGCT GATTGCGGTC AACTGGCTTG TCTATATCTA TGCGATCTTC
ACCGACCATG TGCTCGCGGC GAGCCTTGGC TATTATCTCA ATCCGCTCGT CAATGTGATG
CTGGGGATGC TCTTCCTCGG CGAGCGGCTG TCGCGGATGC AGTTGCTCGC GGTGGTCATT
GCAGGCGTTG GCGTCGCAAT CCTGCTCGCG GGGGCGCTCG ATACGCTGTG GATCAGCCTG
ACGCTGGCCT TTTCCTTTGG CGTCTATGGC CTGCTGCGCA AGGTCGTGCC GGTGGGGTCG
CTCCCCGGCC TGTCGGTCGA GACGACGGTG CTGCTGCTGC CGTCGCTTGC GCTGTCGGCC
TGGTATATCG GCGTCGGCGA CGGGCGCGGC TTTGCGTCCG ACACGTCGAT CAGCCTGCTG
CTGATGGCGG GCGGGGTGGT GACTGCGGTG CCGCTGCTGC TCTTTGCGAC CGCGGCGCGG
CGGATGAGCT ATGCCGCGCT TGGCTTTGTG CAATATCTGG CGCCGACGAT CCAGTTCCTC
TTGAGCCTGT TCGTGTTCGG CGAGCCTTTG AAGCCCGTGC AACTTGCGTG TTTCGTGCTG
ATCTGGATCA GCATTGCGGT GTTCAGTTTC GACATGTGGC GCAAGACGCG CGCCGAGCGG
ATTGTCGCCG TATGA
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| Protein sequence | MAQTAAPAGS DQGGLPFAIA AYGIWGFVPL FFKLVDSVPP VEVLTQRIIW SLPLCFLIML
FRRQIGEYLA ALRDWRTLRL LLASALLIAV NWLVYIYAIF TDHVLAASLG YYLNPLVNVM
LGMLFLGERL SRMQLLAVVI AGVGVAILLA GALDTLWISL TLAFSFGVYG LLRKVVPVGS
LPGLSVETTV LLLPSLALSA WYIGVGDGRG FASDTSISLL LMAGGVVTAV PLLLFATAAR
RMSYAALGFV QYLAPTIQFL LSLFVFGEPL KPVQLACFVL IWISIAVFSF DMWRKTRAER
IVAV
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