| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1424 |
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| Symbol | |
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| ID | 4081741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1475622 |
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| End bp | 1476176 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009790 |
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| Product | aspartyl protease-like protein |
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| Protein accession | YP_616471 |
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| Protein GI | 103486910 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGGGC GGTTTCTTGG GTTAGCGGTG GTCATCACCG CGGTGTCGGT CGGCGTGGCG
AGTGTCGCCA GCCGGTCGGC GGGCGATGAT GCCGAAAACC CGGCGACGGC CTCCTCAGCA
AACGACAACT GGACGACCCA GCGCGGCAAG CGCGGCGACC GGTCCTCGTC CGCTGAGCAG
GTTTCGTCGG CTGGTGAGGT GCGTCTCGCG CGGTCGGGCG ATTCGCATTT CTATGCCGAC
ACCGAAGTCG ACGGCGCCAA TGTCCGCATG ATGGTCGACA GTGGCGCGTC GATCGTCGCG
CTGACGCGGC GCGATGCCGA GGCAATCGGG ATCGACGTCG ATCGCCTGCC GGTCGGAGGC
ATCGCGCGCA CGGCGGGCGG CGACGTGCCG ATGCGGACGG TAATGCTGGA CAGCGTCGAG
GTGCAGGGGA TCGAGGTGCG CGGCGTCCGG GCGGCGGTGA TCGACGCCGA CATGGGTGTG
TCGCTGCTTG GGCAAAGTTT CCTGTCGAAA CTCGATGCGG TGAATGTCGA AGGCGATACG
ATGACGCTGC GCTGA
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| Protein sequence | MIGRFLGLAV VITAVSVGVA SVASRSAGDD AENPATASSA NDNWTTQRGK RGDRSSSAEQ
VSSAGEVRLA RSGDSHFYAD TEVDGANVRM MVDSGASIVA LTRRDAEAIG IDVDRLPVGG
IARTAGGDVP MRTVMLDSVE VQGIEVRGVR AAVIDADMGV SLLGQSFLSK LDAVNVEGDT
MTLR
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