Gene Sala_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1422 
Symbol 
ID4081739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1474537 
End bp1475202 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID638009788 
Productbeta-lactamase-like protein 
Protein accessionYP_616469 
Protein GI103486908 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC CCACTCCCCC GATGCGCGCG GCGATCGTGC CCGTTACCGC CTTTCAGCAG 
AATTGCACGC TCCTGTGGTG CACCGAAACG AACAAGGCGG CCTTTGTCGA TCCTGGCGGC
GACCTGCCCA AGCTGAAAGA GGCGGTGCGG CAGACGGGGG TCGAGGTCGA GAAGATCCTC
GTCACCCATG GCCATATGGA CCATTGCGGG CAGGCGGGAA TGCTCGCGAG GGAACTGGGC
GTGCCGATCG AGGGGCCGCA CGAGGACGAC CGATTCTGGA TCGAACGCTT TGCCGAGGAT
GGCGCGCGTT TCGGCATGGT CGGCGAGCCG TTCGAGCCCG ACCGCTGGCT GGTCGACGGC
GACACGGTGA CCGTCGGCAA TCTGGTGATC GACGTCATCC ACTGCCCCGG CCACACGCCG
GGCCACGTCG TGTTTCACCA TGCGCCGTCG AAACTCGCGA TCGTCGGCGA TGTCATCTTT
CAGGGATCGA TTGGGCGCAC CGACTTCCCG CGCGGCAACC ACCAGCAACT GCTCGATTCG
ATCACGCAAA AGCTCTGGCC ACTCGGCGGC GACACGACCT TCCTGCCGGG GCATGGCGCG
CACAGCAATT TCGCCCACGA ACGGCGGACG AACCCGTTTG TGAGCGATAT GGCGCTGGGC
GGCTAG
 
Protein sequence
MNAPTPPMRA AIVPVTAFQQ NCTLLWCTET NKAAFVDPGG DLPKLKEAVR QTGVEVEKIL 
VTHGHMDHCG QAGMLARELG VPIEGPHEDD RFWIERFAED GARFGMVGEP FEPDRWLVDG
DTVTVGNLVI DVIHCPGHTP GHVVFHHAPS KLAIVGDVIF QGSIGRTDFP RGNHQQLLDS
ITQKLWPLGG DTTFLPGHGA HSNFAHERRT NPFVSDMALG G