Gene Sala_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1416 
Symbol 
ID4081733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1470688 
End bp1471080 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content66% 
IMG OID638009782 
ProductMerR family transcriptional regulator 
Protein accessionYP_616463 
Protein GI103486902 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0849625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.242004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAT TTGACGGCTC GACCGATGAC GGCAAGGCGC GCGGTGCCAT GCTCGCCATC 
GGCGAACTGG CCGAACGCAT CGGCGTGCCG ACACATGTGC TGCGCTATTG GGAAACGCGC
TTTCCGCAGC TCAGGCCGCT ACAAAGGTCG GGTCGCCGCC GCTATTACCG CGCCGAAGAT
GTTGCGCTTG CCGAACGCAT CCACCATTTG CTGCATGTGC AGGGCTTCAC CGTCGAAGGC
GCGCGCAAGG CGCTCGCGAA AGACGGAGCG GCGCCGACGA GCGTAGCGAT CGCCACGCCG
ACTATCGGTA ATGATCCGGC GCGTAAAGGC GCGGGTGTTC CGGTCGAGGC GCTTGTGGCG
CTGCGTGAGC GACTGGCGGC GGCGCTCGAT TAG
 
Protein sequence
MAAFDGSTDD GKARGAMLAI GELAERIGVP THVLRYWETR FPQLRPLQRS GRRRYYRAED 
VALAERIHHL LHVQGFTVEG ARKALAKDGA APTSVAIATP TIGNDPARKG AGVPVEALVA
LRERLAAALD