Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1416 |
Symbol | |
ID | 4081733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1470688 |
End bp | 1471080 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009782 |
Product | MerR family transcriptional regulator |
Protein accession | YP_616463 |
Protein GI | 103486902 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0849625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.242004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAT TTGACGGCTC GACCGATGAC GGCAAGGCGC GCGGTGCCAT GCTCGCCATC GGCGAACTGG CCGAACGCAT CGGCGTGCCG ACACATGTGC TGCGCTATTG GGAAACGCGC TTTCCGCAGC TCAGGCCGCT ACAAAGGTCG GGTCGCCGCC GCTATTACCG CGCCGAAGAT GTTGCGCTTG CCGAACGCAT CCACCATTTG CTGCATGTGC AGGGCTTCAC CGTCGAAGGC GCGCGCAAGG CGCTCGCGAA AGACGGAGCG GCGCCGACGA GCGTAGCGAT CGCCACGCCG ACTATCGGTA ATGATCCGGC GCGTAAAGGC GCGGGTGTTC CGGTCGAGGC GCTTGTGGCG CTGCGTGAGC GACTGGCGGC GGCGCTCGAT TAG
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Protein sequence | MAAFDGSTDD GKARGAMLAI GELAERIGVP THVLRYWETR FPQLRPLQRS GRRRYYRAED VALAERIHHL LHVQGFTVEG ARKALAKDGA APTSVAIATP TIGNDPARKG AGVPVEALVA LRERLAAALD
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