Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1405 |
Symbol | |
ID | 4081761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1459884 |
End bp | 1460915 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009771 |
Product | cytochrome-c oxidase |
Protein accession | YP_616452 |
Protein GI | 103486891 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0686645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.926821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGCT TGAAAACCCC TGTAATCAAG GTGTTAATCG CGGCAGCCTT GTCGCTTGGC GCGGTCGGCG CCGGTCATGC GCAGACCGCC GCGACGGCTC CGACCGCGGC GAATCCGGCG CCGGTCGCCG CGCCCGTCGA AGCCCCCGTC GCGGTTCCGG CGGCTGCCGA TGCGGCGTCG CCCGCGGGCG ACGCGACCTA TGTACCGATG AAGCCGACGC CCGGCGTCGG CCAGCCGGTC GACCGGGGAA TCGACTTCCA GCCGCAGGTC AGCCCGATCG GCGAACAGGC CTATTGGTTC AACCATGTGA TGCTGCTGCC GATCATCACG ATCATCTCGC TCTTCGTTCT CGGCCTGCTG CTGTGGGTTA TCTTTCGCTA TCGCGCCAGG GCGAACCCGG TGCCGTCAAA GACGACACAC AATACCTTCA TCGAGATCGT CTGGACCGCG ATCCCCGTCC TCATCCTCGC GGTGATCGCG GTGCCGTCGA TCCGTCTGCT CGCGGCGCAA TATGAACCGC CCAAGAAGGA CGCGCTGACG ATCAAGGTCA CCGGATACCA ATGGTATTGG GGCTATGCCT ATCCCGACCA GGGCATCGGC GAATATGTGT CGAAGATGCT GACCAAGGAA CAGGCCGACG CCGCGGGCGA GCCGCACCAG CTCGCCGTCG ACAACCGCAT GGTCGTCCCC GTCGGGCGGC AGGTGAAGCT GATCGTCACC GGCGCCGACG TGATCCACAG CTTCGCCGTC CCCGCTTTCT GGACCAAGAT GGACGCGGTT CCCGGCCGCG CCAACGAAAC GACGTTCACC GCCAACAAGG TCGGCGTTTA TTACGGCCAG TGCTCGGAGC TTTGCGGCGT CGATCATGGC TATATGCCGA TCGCGGTCGA AGTGCTGCCG GTCGACAAGT GGGAGGCATG GGTGCGCTCG AAAGGCGGCA ACCCGAATGG CCCGGTCGTC GAGACCGCCG CCGCCACGAC CGTATCCGCG CCAGCTGCGG CTCCCGCCGC CATCCCGGCT GCCAAGAATT AA
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Protein sequence | MKSLKTPVIK VLIAAALSLG AVGAGHAQTA ATAPTAANPA PVAAPVEAPV AVPAAADAAS PAGDATYVPM KPTPGVGQPV DRGIDFQPQV SPIGEQAYWF NHVMLLPIIT IISLFVLGLL LWVIFRYRAR ANPVPSKTTH NTFIEIVWTA IPVLILAVIA VPSIRLLAAQ YEPPKKDALT IKVTGYQWYW GYAYPDQGIG EYVSKMLTKE QADAAGEPHQ LAVDNRMVVP VGRQVKLIVT GADVIHSFAV PAFWTKMDAV PGRANETTFT ANKVGVYYGQ CSELCGVDHG YMPIAVEVLP VDKWEAWVRS KGGNPNGPVV ETAAATTVSA PAAAPAAIPA AKN
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