Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1403 |
Symbol | |
ID | 4081759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1457227 |
End bp | 1458153 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009769 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_616450 |
Protein GI | 103486889 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGAG TGATTATGGC GCAAAGCCTG ACCCATGATG CGATGACGCT CCCCGCCGAC TGGCGCGACC TGCTCGCGCT GACCAAGCCG CGCGTCATGT CGCTGGTGGT GTTCACCGCG CTGTGCGGCC TGCTCGCGGC GCCGGGTGAC GTGCATCCGG TGCTGGGTTT TTCGTCGATC CTCGCGATCG CGCTGGGGGC AGGGGCGTCG GGCGCGCTCA ACCAATGGTA TGAGGCGGGG CTCGACGCCA GGATGAAGCG CACCGCAGGC CGCCCGCTGC CCGCCGGACG GCTCGATCCG CAGACGGCGT TGCAGTTCGG GATCGGGCTC GCTGCCTTTT CGCTGTTCCT GATGCTCTTC GCGTCGAACT GGCAGGCGAC CGTGCTGCTT GCGGGCTCGA TCCTCTTTTA CGTCGTCATC TACACGATGT GGCTGAAGCC CCGGACGCCG CAGAATATCG TCATCGGCGG CGCAGCGGGG GCCTTTCCGC CGCTGATCGG CTGGGTCGCG GCAACAGGAT CGATCGCGCC GCTGCCGGTG CTGCTCTTTC TGCTCATCTT CCTGTGGACG CCGCCGCATT TCTGGGCGCT CGCGCTGTTC GTCCGCTCGG ATTATGCCGC CGCCGGCATT CCGATGATGC CCGTCGTCGC GGGCGAAAAA TCGACGCGGC GCCAGATCCT TTTTTATGCG CTGATTATGG CCGCGGCTGC GATCGCGCCC TGGCCGCTGG GCTATACCGG TGCGCTTTAT GGCTGGACGG CGATTTTGCT CTCGGCAATC TTTGTCCTGT TGTCGGTGCA GGTCGGCATC CGAACGACGG CCGAGGACGA CAGGATGCAG CCCGAAAAGC GGCTTTTCGC TTTCTCGATC GCCTATCTTT TCATCCTGTT CGGCGCGGTG GTGGCCGATC ATTGGTGGCC GCTATGA
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Protein sequence | MAGVIMAQSL THDAMTLPAD WRDLLALTKP RVMSLVVFTA LCGLLAAPGD VHPVLGFSSI LAIALGAGAS GALNQWYEAG LDARMKRTAG RPLPAGRLDP QTALQFGIGL AAFSLFLMLF ASNWQATVLL AGSILFYVVI YTMWLKPRTP QNIVIGGAAG AFPPLIGWVA ATGSIAPLPV LLFLLIFLWT PPHFWALALF VRSDYAAAGI PMMPVVAGEK STRRQILFYA LIMAAAAIAP WPLGYTGALY GWTAILLSAI FVLLSVQVGI RTTAEDDRMQ PEKRLFAFSI AYLFILFGAV VADHWWPL
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