| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1383 |
|---|
| Symbol | |
|---|
| ID | 4081855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1438928 |
|---|
| End bp | 1439830 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009749 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_616430 |
|---|
| Protein GI | 103486869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR03381] N-carbamoylputrescine amidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGCTT TTGCACTGGC AAGATACGCG CCCTGCCCTA TATCCGGCCC CATGACCCGC
ACCATCACCG TTGCCGCGTT GCAGCTTGCC CTGCCCGGCC CCGTCGAACC GAACATCAAG
GCTGTCACCG CGCTTGTCGA GGCAGCGGCG GCAAGGGGCG CGCAGATCAT CCTGCCACCC
GAACTCTTCG AAGGCCCCTA TTTCTGCCAG GTCGAGGAAG AGGAGTTGTT CGCCACCGCA
CGGCCGACGG CCGAGCATCC GAGCGTCGTC GCGATGCAGG CGCTCGCCGC GAAGTGCAAG
GTCGCGATCC CGACGAGCTT TTTCGAACGC GACGGGCATC ATTATTACAA TACGCTGGCG
ATGATCGGTC CCGACGGCGG GATCATGGGC ACCTACCGCA AGTCGCACAT CCCCGACGGG
CCGGGTTACG AAGAAAAATA TTATTTCCGC CCCGGCAACA CCGGCTTCAA GATCTGGGAG
GTCTTCGACA CCCGCATCGG CGTCGGCGTC TGCTGGGACC AATGGTATCC CGAATGCGCG
CGCGCGATGG CGTTGATGGG CGCCGAACTG CTCTTCTACC CGACGGCGAT CGGCAGCGAA
CCCTATGACG CCGACCTCGA CACCAGCCGT ATGTGGCGCC GCGCGATGCA GGGTCATGCC
GTGTCGAACT GTATGCCCGT CATCGCAGCG AACCGCATCG GAACGGAGGG CGACGCGCGT
TTCTATGGCC ACAGCTTCAT CGCCGACGAA TGGGGCGATC TGACGCAGGC GTTTGGCGCC
AGCGAAACGG GTGCGCTCGT CGAGACGATC GACCTCGACC GCGCGGCAAA GCATCGTGCG
GGGATGGGGT TTTTCCGCGA CCGGCGACCA CAGCTTTACG GGCGGCTCGT CGAAGACGTC
TGA
|
|---|
| Protein sequence | MWAFALARYA PCPISGPMTR TITVAALQLA LPGPVEPNIK AVTALVEAAA ARGAQIILPP
ELFEGPYFCQ VEEEELFATA RPTAEHPSVV AMQALAAKCK VAIPTSFFER DGHHYYNTLA
MIGPDGGIMG TYRKSHIPDG PGYEEKYYFR PGNTGFKIWE VFDTRIGVGV CWDQWYPECA
RAMALMGAEL LFYPTAIGSE PYDADLDTSR MWRRAMQGHA VSNCMPVIAA NRIGTEGDAR
FYGHSFIADE WGDLTQAFGA SETGALVETI DLDRAAKHRA GMGFFRDRRP QLYGRLVEDV
|
|---|
| |