| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1378 |
|---|
| Symbol | |
|---|
| ID | 4081850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1434077 |
|---|
| End bp | 1435279 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009744 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616425 |
|---|
| Protein GI | 103486864 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.895761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTCC ATCATCTCGT CGTGCCTTTC GGCGCCGCGC TCGCGCTGGC GATGCCTGCA
TCCGCCAGAA CGATCAGCGT CAGCGCCGAT GCCGCCGACG CGAACGAAAA ATTGCAGGAA
GCGCTGATCC TCGCGCAGCC CGGCGATGTG GTGGAGCTGG GCGCGGGGGT GTGGAAGCTG
ACCGACGGGC TGTCGCTCGA CGTCGCCAAT GTCACCCTGC GCGGCGCGGG AACGGGCGAG
GGCGGATCGA TCCTCGACTT TTCGGGGCAG CAGGGCGCGG GCGAGGGGCT GCTCGTCACC
AGCGACGATG TGCTGCTCAC CAATTTCGCG GTACTCAATA CCAAGGGCGA CGGCATCAAG
TCGAAGGGCG CCGACCGCAT CGTCTATCAC AAGCTGCGCG TCGAATGGAC CGCGGGACCA
AAGGCGACCA ACGGCGCCTA CGGCATTTAT CCGGTCGAAA GCACCGACGT CCTCGTCGAC
AGCGTCTATG TCCGCGGCGC GTCGGACGCC GGCATCTATG TCGGTCAGTC GAAAAATATC
GTCGTGCGCG AATCGGTCGT GACCGAAAAT GTCGCGGGGA TCGAGATCGA GAACAGCTAT
AACGCCGATG TTCACGACAA TATCGCCAAC CGCAACACGG GCGGCATCCT GGTGTTCGAC
CTGCCCAGCC TGCCGATGCA GGGCGGGCAC AATGTCCGCG TCTTTTCGAA CATCGTCAGC
GACAACAGCG TCCCCAATTT CGCGCCGGCG GGCAATATCG TCGCGAGTGT GCCGACGGGG
ACCGGCGTGC TGGTGATGGC GAACCGCAAT GTCGAGATTT TCGACAATAT CTTCGACCAG
AACGGCACCG CCAATGTGAT GATCGTCGGC TATCGCTACG AGCATAAAGA CCCGAAATAT
CAGCCGTTGC CGCGCGCGAT CGTCGTGCGC GACAATCAGC ATGGCAAGGC GGGCTATGCC
CCCGCCTTTC CGGGCGGCGC GGAGATTGCC GCGGCGATGG GTGGCACGCT CCCGCCGGTG
CTGTGGGACG GGTCGGGCGA CGCGATCGTC AACGACGATG TCGGCGTGCT GTCGCTGAAC
CTGCCCGACA TGGCGATGCC GCAAAGCGCG GCGAAGCCGT CGCCCGCCGA CCTCAAAGGC
ACGGCGCCCG CGCCGCTGCC GGGGATCACG CTGCCCGAAA GCATGGAGGC GAAGGTTCGG
TGA
|
|---|
| Protein sequence | MRFHHLVVPF GAALALAMPA SARTISVSAD AADANEKLQE ALILAQPGDV VELGAGVWKL
TDGLSLDVAN VTLRGAGTGE GGSILDFSGQ QGAGEGLLVT SDDVLLTNFA VLNTKGDGIK
SKGADRIVYH KLRVEWTAGP KATNGAYGIY PVESTDVLVD SVYVRGASDA GIYVGQSKNI
VVRESVVTEN VAGIEIENSY NADVHDNIAN RNTGGILVFD LPSLPMQGGH NVRVFSNIVS
DNSVPNFAPA GNIVASVPTG TGVLVMANRN VEIFDNIFDQ NGTANVMIVG YRYEHKDPKY
QPLPRAIVVR DNQHGKAGYA PAFPGGAEIA AAMGGTLPPV LWDGSGDAIV NDDVGVLSLN
LPDMAMPQSA AKPSPADLKG TAPAPLPGIT LPESMEAKVR
|
|---|
| |