Gene Sala_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1377 
Symbol 
ID4081849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1433049 
End bp1434080 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID638009743 
Producthypothetical protein 
Protein accessionYP_616424 
Protein GI103486863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCG TCCTTGCCGC GATCACAGCG GCGTTGCTGT GTAGTAGCGG CGGCACGGCG 
CTGACCCTGC CGACCGTCGA TCAGGCGCTG GTGGAAAGCG ATGCGATGCC CGCGAAGCTC
TCCGTCTTCG GCCTGTTTCG CGGCAATGAT CCGCTCCGCC CAGTGGCGGG TATCGCCTAT
ACGCTGCGCA CGCCCTTGTT CAGCGACTAT GCCGACAAGC ACCGGTTCAT GCTGATCCCG
GAGGGCAAAA GGGCCACGGT TGCAACCGAT GGCGCGATCG ACTTTCCGGT GGGCACGGTG
CTGATCAAGA GCTTCGGCTG GAGCGACGTC AACGCCGGGC GTCCGGTCGA GACGCGGCTG
TTGATCCGCC GCGCGTCGGG CTGGGCGGCG CTGCCCTATA TCTGGGATGC CGACGGCAAG
GATGCGACGC TGGCATTGGG CGGGCGGCGC GTGCCGGTGA GCTTCACGAC CGCGGCGGGC
GAACGCCACG CCATTCGCTA TGCCGTGCCG AACAGGAACC AGTGCAAGGA ATGCCACAGC
CTGAACGGCG AAATCGTGCC GATCGGGCCG AAAGTGCGCA ACCTTGTTCT CGACCCCGCC
GCGTCGGCGT CGCTCCGCGC GCGCTATTTC GATCAGCCCG CGGCGCTCGA ACCGGCGATG
CCCGTTTGGG ACGATCCGGC CAGCGGCAGC ATCGCCGACC GCGCACGCGC CTATCTCGAT
GTCAATTGCG CGCATTGCCA CAATCCGGCG GGCAGCGCGT CGAACAGCGG GCTGTTCCTG
CGCTGGACCG ACGATCCCGC GGGCGTGAAT TACGGCATCG GCAAGCGCCC CACCGCGGCC
GGGCGCGGCA GCGGGGGGAT GGATTTCGCG ATTGCGCCCG GTGATCCCGA GCGCAGCTTC
ATGATCTATC GCCTCGAAAG CACCGATCCC GGAATTGCGA TGCCCGAGGT CGGGCGCTCG
ACGGTGCATC GGGAGGGCGC GGCGCTGCTG CGGCAATGGA TTGCGGAGAT GGTGAAGGAC
GGCTCGCGCT GA
 
Protein sequence
MKRVLAAITA ALLCSSGGTA LTLPTVDQAL VESDAMPAKL SVFGLFRGND PLRPVAGIAY 
TLRTPLFSDY ADKHRFMLIP EGKRATVATD GAIDFPVGTV LIKSFGWSDV NAGRPVETRL
LIRRASGWAA LPYIWDADGK DATLALGGRR VPVSFTTAAG ERHAIRYAVP NRNQCKECHS
LNGEIVPIGP KVRNLVLDPA ASASLRARYF DQPAALEPAM PVWDDPASGS IADRARAYLD
VNCAHCHNPA GSASNSGLFL RWTDDPAGVN YGIGKRPTAA GRGSGGMDFA IAPGDPERSF
MIYRLESTDP GIAMPEVGRS TVHREGAALL RQWIAEMVKD GSR