Gene Sala_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1376 
Symbol 
ID4081848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1432258 
End bp1432890 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID638009742 
Productmaleylacetoacetate isomerase 
Protein accessionYP_616423 
Protein GI103486862 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC TCGTCCTCCA CGATTATTTC CGCTCCTCGG CCAGCTTTCG CGTGCGCATC 
GCGCTGAACC TCAAGGGGCT CGATTATGAG CGCGTCGAGG TCAGCCTGAT CGCTGGCGAA
CAGCGCAGCG ATGCCTATCT CGAGCAGAAT GCGCAAGGCT TCGTGCCGAT GCTCGTCGTC
GATGGCGAGC CGATCATCCA GAGCATGGCG ATCATCGACT GGCTCGATCG CGCCTTTCCG
CAGCCGCGGC TTATCCCCGA CGATGCCATG CCGCGCGCGG TCGCCTTGGC GCAGGCGCAG
GTGATCGCGA GCGACATCCA TCCGCTCAAC AACCTCCGCG TGCTCAAATA TCTGAAGCGC
GACCTGGGAT TGAACGAGCA GACCAAGGAC CGCTGGTATC GCCACTGGAT CGTGCAGGGA
TTCGACGCGC TCGAAGCGAT GGCGGGCGAC GGCAGGTTTC TCGGCGGCGA CGCGCCGGGG
ATCGCCGACT GCTGCCTCGT GCCGCAAATG TATAATGCGC GGCGGTTCGA GACGCCGCTG
GACGATTATC CGCGGCTGGT GGCGATCGAC GCGGCGTGCA TGGAGCTGGA AGCCTTCCAG
AAGGCGCATC CCGACGCGGT GAAGCCCGCG TGA
 
Protein sequence
MTNLVLHDYF RSSASFRVRI ALNLKGLDYE RVEVSLIAGE QRSDAYLEQN AQGFVPMLVV 
DGEPIIQSMA IIDWLDRAFP QPRLIPDDAM PRAVALAQAQ VIASDIHPLN NLRVLKYLKR
DLGLNEQTKD RWYRHWIVQG FDALEAMAGD GRFLGGDAPG IADCCLVPQM YNARRFETPL
DDYPRLVAID AACMELEAFQ KAHPDAVKPA