| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1336 |
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| Symbol | |
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| ID | 4081009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1398541 |
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| End bp | 1399332 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009701 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_616383 |
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| Protein GI | 103486822 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.341301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0949084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TCCGCGACGG CCTGCTGGCC GGAAAGACCG CGTTCGTTGC CGGCGGGACG
AGCGGTATCA ACCTGGGCAT CGCCAAACGC TTTGCCGAAC TGGGCGCCAA AGTCGCGGTG
GCGGGCCGCG ATCCCGACAA GGCGGCACAT GCCGCGGCCG CGATCGGCGA GGGCGCTCTC
GGCCTGTCGG GCGATGTGCG CGACTATGCC GCGATCCGCG GCGTGATGGA GCGGGTCGCG
GGCGAGCTGG GGCCGATGGA TATCGTCGTT TCCGGTGCCG CGGGCAATTT TCTGGCCCCC
GTTCTCGGCA TGTCGGCGAA CGCCTTTCGC ACCGTTGTCG ATATCGACCT CAACGGCACC
TTCAATGTCT TTCGCGGCTG CCACGACCTG TTGGTGCGGC CCGGCGCATC GCTGATCGCA
ATCACGGCGG GGCAGGCGGT CAACGCCTCC GCCTTGCAGG CGCACGCCTG TGCGGCGAAG
GCGGGGATCA ACCAGCTGAT CCGCGTGCTC GCGCTCGAAT GGGGGCCGGA GGTGCGCGTC
AACGGCATCT CGCCCGGCCC GATCGCCGAT ACCGAAGGGA TGAAGCGCCT CGCGCCCGAT
GCCGCCACGC GGCAGGCGCA TTACGACCGC ATCGCGATGA AACGCTGGGG CCGGATCGAG
GAGGTGGCCG AATCGGCGGT GTTCCTCTGC TCGCCCGCCG CGGGCTATAT CACCGGGACG
ATCCTCGATT GCGACGGCGG CAGCCAGATC GGCGATGCGT CGCGCGGCGA CCTGGCGAAG
GGCATGGTCT GA
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| Protein sequence | MTTFRDGLLA GKTAFVAGGT SGINLGIAKR FAELGAKVAV AGRDPDKAAH AAAAIGEGAL
GLSGDVRDYA AIRGVMERVA GELGPMDIVV SGAAGNFLAP VLGMSANAFR TVVDIDLNGT
FNVFRGCHDL LVRPGASLIA ITAGQAVNAS ALQAHACAAK AGINQLIRVL ALEWGPEVRV
NGISPGPIAD TEGMKRLAPD AATRQAHYDR IAMKRWGRIE EVAESAVFLC SPAAGYITGT
ILDCDGGSQI GDASRGDLAK GMV
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