| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1330 |
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| Symbol | |
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| ID | 4081001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1392648 |
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| End bp | 1393679 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009693 |
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| Product | transketolase, central region |
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| Protein accession | YP_616377 |
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| Protein GI | 103486816 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0296032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.157339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG AAACCCGGAC GAAAACCATG AACATGATCG AGGCGATCAA CAGCGCCATG
GACGTCATGC TCGAACGCGA TCCCGCGACC GTCGTGATGG GCGAGGACGT CGGCTATTTC
GGCGGCGTTT TCCGCGCCAC CGCGGGCCTC CAGAAAAAGC ATGGCAAGAC GCGCGTGTTC
GACACGCCGA TCAACGAATG CGGCATCATC GGCGTCGCGG TCGGCATGGG CGCCTATGGT
CTGCGCCCCG TCCCCGAAAT CCAGTTCGCC GATTATATCT ATCCGGGGCT CGACCAGCTC
GTCAGCGAGG CGGCGCGCCT GCGCTATCGC TCGGCGAACG ACTATATATG CCCGATGACG
GTGCGCACAC CGTTCGGCGG CGGGATTTTC GGCGGCCAGA CGCACAGCCA GTCGCCCGAA
AGCATCATGA CGCATATCTG CGGCGTCAAG ACGGTGATCC CGTCGAACCC CTATGATGCC
AAGGGGCTGC TGATCGCGGC GATCGAGGAT AACGACCCCG TCGTCTTCCT CGAACCCAAG
CGCATCTATA ACGGCCCGTT CAGCGGCTAT TACGATCGCC CGGTCGAACC CTGGTCGAAG
CATGACGCCA GTGCGGTGCC CGAGGGCTAT TACCGCATCG ACCTGGGGAA AGCGGCGACG
GTGCGCGAGG GCGAAGCGGT GACCGTACTC GCCTATGGCA CAATGGTTCA TGTCGCAAAG
ACGATCATCG AGGAAATGGG GATCGACGCC GAAATCCTCG ACCTGCGCAC GCTGTTGCCG
CTCGACATAG CGGCGATCGA GGCGTCGGTG AAAAAGACCG GCCGCTGCCT GATCATCCAC
GAAGCGACGC GCACGTCGGG TTTTGGCGCC GAACTCGCCG CGCTGGTGCA GGAACGCTGC
TTCTATCATC TCGAGGCGCC CGTCGAGCGC GTCACCGGTT TCGACACGCC CTATCCGCAC
AGCCTGGAAT GGGCCTATTT CCCCGGCCCG GTGCGCATTG CGACCGCGCT GACCAAGATT
TTGAAGGACT GA
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| Protein sequence | MSAETRTKTM NMIEAINSAM DVMLERDPAT VVMGEDVGYF GGVFRATAGL QKKHGKTRVF
DTPINECGII GVAVGMGAYG LRPVPEIQFA DYIYPGLDQL VSEAARLRYR SANDYICPMT
VRTPFGGGIF GGQTHSQSPE SIMTHICGVK TVIPSNPYDA KGLLIAAIED NDPVVFLEPK
RIYNGPFSGY YDRPVEPWSK HDASAVPEGY YRIDLGKAAT VREGEAVTVL AYGTMVHVAK
TIIEEMGIDA EILDLRTLLP LDIAAIEASV KKTGRCLIIH EATRTSGFGA ELAALVQERC
FYHLEAPVER VTGFDTPYPH SLEWAYFPGP VRIATALTKI LKD
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