| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1318 |
|---|
| Symbol | pgk |
|---|
| ID | 4082242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1375616 |
|---|
| End bp | 1376812 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009680 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_616365 |
|---|
| Protein GI | 103486804 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.575519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.28013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGT TCAAGACCCT CGACGATATC GGTGACGTCA CCGGCAAGCG CGTCCTCGTG
CGCGTCGATC TCAACGTCCC GATGATCGAT GGCGCGGTCA GCGACGCGAC GCGCATCCAG
GCGGCGATGC CGACGATCCG CGAATTGTCG GACAAGGGCG CGATTGTTCT GCTGCTCGCG
CATTTCGGGC GGCCGAAGGG GGCGAAGAAC CCGACGCAGT CATTGAGCCT CGTCATGGGC
GGCGTCGAGG ATGTGCTGGG CCATTCGGTG ATGTTCATTC CCGAAGCGGT CGGCGAGGGC
GCGAAGGCGG GCGTTGCCGT GCTCGCGCCG GGCGATGTCG CGGTGCTCGA GAACACGCGC
TTCTATCCCG GCGAGGAGCA GAACGACCCG GCCTTTGCCG ATGCGCTCGC TGAAATCGGC
GACCTGTATG TCAATGACGC CTTTTCGGCC GCGCACCGCG CGCATGGCTC GACCGAAGGC
ATCGCCCGGC GGCTTCCGGC CTATGCAGGG CGTGCGATGG AGGCCGAGCT GAAGGCGCTT
GACGCCGCGC TCGGCAATCC GGTGCAGCCG GTCGCGGCGG TCGTCGGCGG CGCCAAGGTG
TCGAGCAAGA TCGATGTGCT GAGGAACCTC GTCGGAAAGG TCGATCACCT CATCATCGGC
GGAGGCATGG CGAACACCTT TCTTGCCGCG CGCGGCGTCG ACGTCGGCAG GTCGCTGTGC
GAGCATGAGC TGGTCGATAC CGCCAATGCG ATTTTCGACG CCGCCGACGC CGCGGGCTGC
ACCATCCATC TGCCCTATGA CGTCGTGGTG GCAAAAGAGT TTGCGCCGAA CCCGCCGACG
CGCACCGTCA ACGTCCATGA GGTCGCCGCC GACGAGATGA TCCTCGACGT CGGGCCCGCC
GCGATCGAAG CCCTCGCGGA CGTACTCAAA AACTGTCGCA CGCTGGTGTG GAACGGTCCG
CTCGGCGCGT TCGAGACGCC ACCCTTCGAC ACCGCGACCG TTGCGCTGGC CAGGACCGCT
GCCGCGTTGA CGCGCGAGGG ATCGCTCACC TCGGTCGCGG GCGGTGGCGA TACCGTCGCG
GCGCTCAATC ATGCGGGGGT GGCCGGCGAC TTCACCTTTG TTTCGACCGC CGGCGGAGCC
TTCCTCGAAT GGATGGAAGG CAAGCCGCTG CCGGGCGTGG ACGCCCTCAA AGCCTGA
|
|---|
| Protein sequence | MTAFKTLDDI GDVTGKRVLV RVDLNVPMID GAVSDATRIQ AAMPTIRELS DKGAIVLLLA
HFGRPKGAKN PTQSLSLVMG GVEDVLGHSV MFIPEAVGEG AKAGVAVLAP GDVAVLENTR
FYPGEEQNDP AFADALAEIG DLYVNDAFSA AHRAHGSTEG IARRLPAYAG RAMEAELKAL
DAALGNPVQP VAAVVGGAKV SSKIDVLRNL VGKVDHLIIG GGMANTFLAA RGVDVGRSLC
EHELVDTANA IFDAADAAGC TIHLPYDVVV AKEFAPNPPT RTVNVHEVAA DEMILDVGPA
AIEALADVLK NCRTLVWNGP LGAFETPPFD TATVALARTA AALTREGSLT SVAGGGDTVA
ALNHAGVAGD FTFVSTAGGA FLEWMEGKPL PGVDALKA
|
|---|
| |