| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1311 |
|---|
| Symbol | |
|---|
| ID | 4082235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1370494 |
|---|
| End bp | 1370868 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638009673 |
|---|
| Product | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 |
|---|
| Protein accession | YP_616358 |
|---|
| Protein GI | 103486797 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.575897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.960187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATC TGACTCAGTA TCTGCCGATC CTGATATTCC TGGTCATTGC GGTCGGGTTA
TCGGCGGCCT TCGTCTTCCT GCCGATGGGC GTCGCGCGAC TGACCGGCGC GCACAAGCCC
GACCCCGCGA AGCTCAGCGA ATATGAATGC GGCTTTCCGG CGTTCGAGGA TGCGCGCAGC
CAGTTCGATG TGCGATTCTA TCTCGTCGCC ATCCTGTTCA TCATCTTCGA CCTCGAAGCC
GCCTTCCTCT TTCCCTGGGC GGTAAGCCTG GAGGAAATCG GCTGGGCCGG CTGGGTCACG
ATGATGGTTT TCCTTGCCGA GCTTGCGATC GGCCTGATTT ACGCATGGAA GAAAGGGGCG
TTGGATTGGG AATGA
|
|---|
| Protein sequence | MVDLTQYLPI LIFLVIAVGL SAAFVFLPMG VARLTGAHKP DPAKLSEYEC GFPAFEDARS
QFDVRFYLVA ILFIIFDLEA AFLFPWAVSL EEIGWAGWVT MMVFLAELAI GLIYAWKKGA
LDWE
|
|---|
| |