| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1308 |
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| Symbol | |
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| ID | 4082232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1367791 |
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| End bp | 1369047 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009670 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_616355 |
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| Protein GI | 103486794 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.652404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.522315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG CTCCTCAGGT CAGGCACCAC GGCAGCGACA TGTTTGAAGG CTATCCGGTC
GATACCGCGA ACACCGCGGG CGATCAGGCC GTCACCAATT ACACGATCAA CTTCGGCCCG
CAGCATCCCG CGGCGCACGG CGTGCTGCGC ATGGTGATGG AGCTCGACGG CGAGATCATC
GAGCGCGTCG ACCCGCACGT CGGGCTGCTC CATCGCGGCA CCGAAAAGCT GATCGAATAC
AAGACCTATT TGCAGGCTTT GCCCTATTTC GACCGGCTCG ACTATTGCTC GCCGCTCGGC
ATGGAGCACA GCTATGTGCT CGCGATCGAG AAATTGCTCG ACCTCGAAGT CCCGGCGCGC
GCGCAATATC TCCGCACGAT GTTCGCCGAG CTGACGCGCA TCTGCAACCA TATGCTCAAC
ATCGGGTCGC ACGTCATGGA CGTCGGCGCG ATGACGCCAA ACCTGTGGGT GTTCGAACTG
CGCGAAGATT GCCTGAACTT CTTCGAGCGG GCGTCGGGTG CGCGGATGCA CTCGGCGTAC
TTCCGTCCGG GTGGCGTCCA TCAGGACGTC CCCGAAAAAC TGCTCGTCGA CATCGGCGAA
TGGGTCGAAA CGCGGCTGCC GAAGCTGTTC GGCGACGCGA TGAGCCTGGT CATCGACAAC
CGCATCTTCA AGCAGCGCAA CGTCGACATC GCGACAGTGA GCAAGGAAGA CGCGCTGGCG
TGGGGCTTCT CAGGCCCGAT GATCCGCGGC AGCGGCATCG CGTGGGATCT GCGCAAATCG
CAGCCCTATG ACGCCTATGC CGCGATGGAG TTCGACATTC CCGTCGGCAC GCGCGGCGAC
TGCTATGACC GCTTCATGGT GCGCGTCGAG GAAGTCTATC AGTCGGCAAA GATCATCAAA
CAGTGCCTGC GCGACATGCC GACCGGCCCG ATCGCCAGCC TCGACCGCAA GGTCGTGCCG
CCGAAGCGCG GCGAGATGAA GCAGTCGATG GAATCGCTGA TCCACCACTT CAAACTCTAC
ACCGAGGGTT TCCACGTCCC CGCGGGCGAG GTTTATGTCG CGACCGAAAG CCCGAAGGGT
GAATTCGGCG TCTATCTGGT CAGCGACGGC ACCAACAAGC CGTACCGCTG CAAGATCCGC
CCGACGGCGT TTTCGCACCT GCAGGCGATG GACATGATGT CGAAGGGCCA TATGCTTGCG
GATACGACCG CGATCATCGG CGCGATCGAC GTGGTGTTCG GGGAGTGTGA CCGGTGA
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| Protein sequence | MTDAPQVRHH GSDMFEGYPV DTANTAGDQA VTNYTINFGP QHPAAHGVLR MVMELDGEII
ERVDPHVGLL HRGTEKLIEY KTYLQALPYF DRLDYCSPLG MEHSYVLAIE KLLDLEVPAR
AQYLRTMFAE LTRICNHMLN IGSHVMDVGA MTPNLWVFEL REDCLNFFER ASGARMHSAY
FRPGGVHQDV PEKLLVDIGE WVETRLPKLF GDAMSLVIDN RIFKQRNVDI ATVSKEDALA
WGFSGPMIRG SGIAWDLRKS QPYDAYAAME FDIPVGTRGD CYDRFMVRVE EVYQSAKIIK
QCLRDMPTGP IASLDRKVVP PKRGEMKQSM ESLIHHFKLY TEGFHVPAGE VYVATESPKG
EFGVYLVSDG TNKPYRCKIR PTAFSHLQAM DMMSKGHMLA DTTAIIGAID VVFGECDR
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