| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1305 |
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| Symbol | |
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| ID | 4082229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1365440 |
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| End bp | 1366732 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009667 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_616352 |
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| Protein GI | 103486791 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.652404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.801991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCG CCGACAAGGA CCGCATTTTC ACCAATCTCT ACGGCTTCCA GCCGTGGAAC
CTCAAAGCTG CGCAGGCGCG CGGCGATTGG GATAATACCA GGGATCTGAT GAAGCGCGGC
CAGGACGCGA TCATCGAGGA GATCAAGGCG TCGGGCCTGC GCGGTCGCGG CGGCGCGGGC
TTCCCGACGG GGCTCAAGTG GAGCTTCATG CCGAAGGAGC CGCGCGCCGA CCGCCCGAGC
TTCCTTGTCA TCAACGCCGA CGAATCCGAA CCGGGGTCGT GCAAGGACCG CGAGATCATC
CGTCACGATC CGCACAAGCT GATCGAAGGC GCGCTGATCG CGGGCTATGC GATGCGCGCC
CGCGCCGCGT ACATCTATAT TCGCGGCGAG TTCATCCGCG AGGCCGAAAC ACTCTTCGCG
GCGGTGCAGG AGGCGTATGA CGCCGGCCTG CTCGGCAAGA ATGCGGCGAA GTCGGGTTAT
GACTTCGACG TTTTCGTCCA CCGCGGCGCC GGCGCGTACA TCTGCGGCGA AGAAACCGCG
ATGATCGAGA GCTTGGAAGG CAAGAAGGGC CAGCCGCGTC TGAAACCCCC GTTCCCGGCG
GGCGCGGGCC TCTATGGCTG CCCGACGACG GTGAACAATG TCGAAAGCAT CGCGGTCGTC
CCGACGATCC TGCGGCGCGG CGCGCCGTGG TTCGCGAGCT TCGGGCGCGA GAATAACAAG
GGCACCAAGC TCTTCCAGAT CAGCGGCCAT GTGAACAAGC CGTGCGTCGT CGAGGAAGAG
ATGAGCATCC CCTTCCGCGA ACTGATCGAC AGGCATTGCG GCGGCATTCG CGGCGGCTGG
GACAATCTGC TCGCGGTGAT CCCCGGCGGT TCGTCGGTGC CGCTGGTTCC GGCGGCGGAA
ATCATGGACT GCCCGATGGA TTTCGACGGG CTGAAGGCCG TGGGTTCGGG CCTCGGCACC
GCGGCCGCGA TCGTAATGGA CAAGTCGACC GACGTCGTTC AGGCGATCAG CCGCATCAGC
TATTTCTACA AGCATGAAAG CTGCGGCCAT TGCACGCCAT GCCGCGAGGG CACCGGCTGG
ATGTGGCGCG TGATGGAGCG GCTGCGCACC GGCGACGCCG ACATCAGCGA GATCGACACC
TTGTTCGACG TGACCAAGCA GGTCGAAGGC CACACGATCT GCGCGCTCGG CGACGCCGCG
GCGTGGCCGA TCCAGGGCCT GATCCGCCAC TTCCGCCCCG AACTCGAACG CCGCATCCGC
GAGAATGGTG GTGCGCTGGA GGCGGCGGAG TGA
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| Protein sequence | MSLADKDRIF TNLYGFQPWN LKAAQARGDW DNTRDLMKRG QDAIIEEIKA SGLRGRGGAG
FPTGLKWSFM PKEPRADRPS FLVINADESE PGSCKDREII RHDPHKLIEG ALIAGYAMRA
RAAYIYIRGE FIREAETLFA AVQEAYDAGL LGKNAAKSGY DFDVFVHRGA GAYICGEETA
MIESLEGKKG QPRLKPPFPA GAGLYGCPTT VNNVESIAVV PTILRRGAPW FASFGRENNK
GTKLFQISGH VNKPCVVEEE MSIPFRELID RHCGGIRGGW DNLLAVIPGG SSVPLVPAAE
IMDCPMDFDG LKAVGSGLGT AAAIVMDKST DVVQAISRIS YFYKHESCGH CTPCREGTGW
MWRVMERLRT GDADISEIDT LFDVTKQVEG HTICALGDAA AWPIQGLIRH FRPELERRIR
ENGGALEAAE
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