Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1302 |
Symbol | |
ID | 4082594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1361460 |
End bp | 1362503 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638009664 |
Product | respiratory-chain NADH dehydrogenase, subunit 1 |
Protein accession | YP_616349 |
Protein GI | 103486788 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0656687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.344257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT TTTTCCAATC GCTCGGCATG TCCTATGAAT GGGCTTGGGG GCTTGCGACC GTCGCGGGCA TCCTGCTCAT CGCGCTGCCA TTGATGCTCG CGGTCGCGAT GATCATTTAT GCCGACCGCA AGATCTGGGC GGCGATCGCG CTGCGCCGGG GTCCGAACGT CGTCGGGCCG TTCGGCCTGC TCCAGTCGTT CGCCGACGGC CTCAAAGTGT TTCTGCAGGA AACGATCATC CCGTCGGGCG CCAATCGGGG CCTGTTCCTG ATCGCGCCGA TCATCACCTT TACCGTCGCG CTGCTCGCCT GGGCGGTGAT TCCGTTCAAT TCGGGCGCGG TGCTCGCCGA CATCAATGTC GGCCTGCTCT ATATCCTCGC GATTTCGTCG CTCGGCGTTT ATGGCGTGAT CCTGTCGGGC TGGGCGTCGA ACTCGAAATA TCCCTTCTTT TCCGCGCTCC GCGCCTCGGC GCAGATGATC AGCTATGAAG TGTCGATCGG CTTCATCCTG ATCGGCGTCG TGCTGTTTGC CGACAGTTTC AACATGAACG AGATCGTCAA GGCGCAGCAG GGCCACGGGC TCGGCATCGT CAACGCCTTC GGCTTCAACC TGCTGCTGTT CCCGCTCGCG GTGATGTTCC TGATCTCGTC GCTCGCCGAA ACCGCGCGCG CGCCGTTCGA TCTGACCGAA GCCGAAAGCG AGCTCGTCGC GGGCTATCAG ACCGAATATT CGTCGATGAG CTTCGCGCTC TTCTGGCTCG GCGAATATGC TAACGTCCTT CTGATGTGCA CACTCAACGC GGTGCTGTTC TGGGGCGGCT GGCTGCCTCC GATCGACTGG GCGCCGCTCT ATGCCGTCCC CGGCATCATC TGGCTGTTCG CGAAGATCCT GTTCTTCTTC TTCGTCTTCA GCTGGGTCAA GGCGACCGTT CCGCGCTACC GCTATGACCA GCTCATGCGG CTGGGCTGGA AAATCTTCCT GCCGATTTCG CTGATCTGGA TCTTCCTGAT CTCCGGCTAT CTGATGCTGA CGAGGTATTC ATGA
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Protein sequence | MTDFFQSLGM SYEWAWGLAT VAGILLIALP LMLAVAMIIY ADRKIWAAIA LRRGPNVVGP FGLLQSFADG LKVFLQETII PSGANRGLFL IAPIITFTVA LLAWAVIPFN SGAVLADINV GLLYILAISS LGVYGVILSG WASNSKYPFF SALRASAQMI SYEVSIGFIL IGVVLFADSF NMNEIVKAQQ GHGLGIVNAF GFNLLLFPLA VMFLISSLAE TARAPFDLTE AESELVAGYQ TEYSSMSFAL FWLGEYANVL LMCTLNAVLF WGGWLPPIDW APLYAVPGII WLFAKILFFF FVFSWVKATV PRYRYDQLMR LGWKIFLPIS LIWIFLISGY LMLTRYS
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