| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1298 |
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| Symbol | |
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| ID | 4082590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1357865 |
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| End bp | 1359910 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009660 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_616345 |
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| Protein GI | 103486784 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.9729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCAGG CGATCGTTTT CCTGCCGCTG CTCGCGGCGC TTGTTGCAGG GCTTGGCCAG
CGCGCCATCG GCCCCTTCGC ATCGAAGCTG GTCACGACCG GCGCGCTGTT CACCAGCTGC
GCGCTCAGCT GGCCGATCTT CCTGTCCTTC GTGGCGGGGA CCGGCGAGGC CGAAGTCGTC
ACCGTGCTGC ATTGGGTGTC GTCGGGCGCA CTCCAGTTCG ACTGGGCGCT GCGCGTCGAC
ACGCTGACCG CGGTGATGCT CGTCGTCATC ACGACGGTGT CGGCGCTCGT CCACCTCTAT
AGCTGGGGCT ATATGGAGGA AGACCCGGAC CAGCCGCGCT TCTTCGCTTA CCTGTCGCTC
TTCACCTTTG CGATGCTGAT GCTGGTGACC GCAGACAATC TGGTCCAGAT GTTCTTCGGC
TGGGAAGGCG TCGGCCTTGC CTCCTATCTG CTCATCGGCT TCTGGTACAA GAAACCGAGC
GCCAATGCCG CGGCGATCAA GGCGTTCGTC GTCAACCGCG TCGGCGATTT GGGCTTCATG
CTCGGCATCT TCGGCACCTT CCTGGTGTTT GGCACCGTCT CGATCCCCGA GATCCTTGCG
GCCGCGCCGG GCATGGCGGG TTCGACGATC GGCTTTTTCG GCTATCGCGT CGATACGATG
ACCTTGCTCT GCCTGCTGCT GTTCATCGGC GCGATGGGCA AGTCGGCGCA GCTCGGGCTC
CACACCTGGC TGCCCGACGC GATGGAGGGT CCGACGCCGG TGTCGGCGCT GATCCACGCC
GCGACGATGG TCACGGCGGG CGTCTTCATG GTGTGCCGCC TTTCGCCGAT GTTCGAGACC
GCGCCGATCG CGCTGGGCGT CGTCACCTTC GTCGGCGCCG CGACCTGCCT GTTCGCCGCG
ACTGTCGGCA CGACGCAATG GGACATCAAG CGCGTCATCG CCTATTCGAC ATGCTCGCAA
CTCGGCTACA TGTTCTTCGC CGCGGGCGTC GGCGCCTATG GCGCGGCGAT GTTCCACCTG
TTCACGCACG CCTTCTTCAA GGCTCTGCTG TTCCTCGGCG CGGGGTCGGT GATCCATGCG
ATGCACCACG AACAGGATAT GCGTTATTAC GGCGGCCTTC GGAAACATAT CCCGCTCACC
TATTGGGCGA TGATGATGGG CACGCTGGCG ATCACCGGCG TCGGCATCGC CGGGGTCGCG
GGCTTCGCGG GCTTCCATTC GAAGGACGGC ATCCTCGAGG CGGCCTTTGC TGCCGGCGGC
GGCGGCGTGG TCGCTTTCTG GGTCGGTATT TTCGCCGCAC TGCTGACGAG CTTCTATTCG
TGGCGCCTCG TTTTCCTGAC CTTCTATGGC AAGCCGCGGT GGGAAGCGAG CGAGCATATT
CAGCATGCGG TGCATGGCGA ACATGAAGAG CCCTCGGATG AACATTCGAG CGGCAATCAT
GCGCCTCATC ACCACGATCC CCACGGCGAC GGCACCGCGG GCTACCATCC GCACGAAAGC
CCGCTGTCGA TGCTGATCCC GCTCGGCGTG CTGTCGCTCG GCGCGGTGTT CGCAGGCTTC
GTCTTCGCGC ACCCCTTCAT CTATCCCGAA GAAGGCAAGA CTTTCTGGGC GGACAGCATC
GCGTTCGACG AGCATCTGAT GCACCTCGCG CACGAAGTGC CGACCTGGGT GAAGTGGGCG
CCGTTCGCGG TGATGGCGAT CGGGCTGTTC CTCGCGTGGA ACAGCTATGT CCGCAACACC
AGCCTGCCGG CGCGCTTTGC GGCGCAATTC CGGCTGCTCT ACCAGTTCCT GTACAATAAA
TGGTATTTCG ACGAGCTCTA CAACATCCTC TTCGTAAAGC CCGCCTTTGC GATCGGCCGC
TTCTTCTGGA AGCGCGGGGA TGAAGGCACC ATCGACCGCT TCGGTCCCGA TGGTGCCGCG
GCGCTCGTCG CCGGGGGGAC GCGGCTCGCG GTCCGGCTGC AATCGGGTTA TGTTTATGGA
TATGCGTTTG TGATGCTGCT CGGTCTTGTC GGCCTCGCCA GCTGGGCCAT GGTGAATTTC
CTGTGA
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| Protein sequence | MIQAIVFLPL LAALVAGLGQ RAIGPFASKL VTTGALFTSC ALSWPIFLSF VAGTGEAEVV
TVLHWVSSGA LQFDWALRVD TLTAVMLVVI TTVSALVHLY SWGYMEEDPD QPRFFAYLSL
FTFAMLMLVT ADNLVQMFFG WEGVGLASYL LIGFWYKKPS ANAAAIKAFV VNRVGDLGFM
LGIFGTFLVF GTVSIPEILA AAPGMAGSTI GFFGYRVDTM TLLCLLLFIG AMGKSAQLGL
HTWLPDAMEG PTPVSALIHA ATMVTAGVFM VCRLSPMFET APIALGVVTF VGAATCLFAA
TVGTTQWDIK RVIAYSTCSQ LGYMFFAAGV GAYGAAMFHL FTHAFFKALL FLGAGSVIHA
MHHEQDMRYY GGLRKHIPLT YWAMMMGTLA ITGVGIAGVA GFAGFHSKDG ILEAAFAAGG
GGVVAFWVGI FAALLTSFYS WRLVFLTFYG KPRWEASEHI QHAVHGEHEE PSDEHSSGNH
APHHHDPHGD GTAGYHPHES PLSMLIPLGV LSLGAVFAGF VFAHPFIYPE EGKTFWADSI
AFDEHLMHLA HEVPTWVKWA PFAVMAIGLF LAWNSYVRNT SLPARFAAQF RLLYQFLYNK
WYFDELYNIL FVKPAFAIGR FFWKRGDEGT IDRFGPDGAA ALVAGGTRLA VRLQSGYVYG
YAFVMLLGLV GLASWAMVNF L
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