| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1297 |
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| Symbol | |
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| ID | 4082589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1356315 |
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| End bp | 1357868 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009659 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_616344 |
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| Protein GI | 103486783 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.310609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCT TTCCGATCCT TTCGCTGATG CTGGCGGTCC CGCTGATCGC CGCCATCCTC
TGCCTCTATG CGGGCGACCG TAACGCACGT GTTATCGCGC TCGCCGCGAC GCTGATCGAT
TTTGCGCTGG GCATCGTGCT CTGGGCCAGT TTCGACATCG GCGGCGCGCA GTGGCAGTTT
ACCGAGCGCG CTGACCTGTT CGGCCGCTTC CAGTGGGCAC TCGGCATCGA CGGCATGGCG
CTGATGCTGA TCATGCTCAG CGTCTTCCTC ATGCCGCTGT GCATCCTCGC GAGCTGGGAA
GCGATCAAGA GCCGTGTCGG GCTCTACATG GCGATGTTCC TGATCATGGA AGTCGTGATG
ATCGGCGTCT TCATGGCGCA GGATCTGCTG CTCTTTTACA TCTTCTTCGA AGCCGGTCTG
ATCCCGATGT ATTTCATCAT CGGCATCTGG GGCGGCGCGA ACCGCAAATA TGCGGCGTTC
AAATTCTTTC TCTACACGCT GCTCGGTTCG GTGCTGATGC TGATCGCGAT GATCGCGATG
ATCGCCGAGG CGGGCACGAC CGACATCCCG ACGCTGCTCA ACTATGACTT CCCGGTCGAA
ATGCAGACAT GGCTGTGGCT CGCCTTCTTC GCCAGCCTCG CGGTCAAGAT GCCGATGTGG
CCCGTCCACA CCTGGCTTCC CGACGCGCAT GTGCAGGCGC CGACCGCGGG CTCGATGATC
CTGGCGGGTG TGCTCCTGAA GCTCGGCGCC TATGGCTTCC TGCGCTTCAT GATGCCGATG
TTCCCCGACG CTTCGGCGCA GCTGATGTGG CTGGTGTTCG GTCTGTCGAT GGTCGCGGTG
GTCTATACCA GCCTTGTCGC GCTGGTGCAG AACGACATGA AGAAGCTGAT CGCCTATTCG
TCGGTCGCCC ACATGGCGAT CGTCACCGCG GGCCTCTTCG CTTTCAACCA GCAGGGGATC
GAGGGCGCGC TGATCATCAT GCTCAGCCAT GGCGTCGTCT CGGCCGCGCT CTTCTTCTGC
GTCGGCGTGA TCTATGACCG GCTGCATACG CGCGAGATCG ATCGCTACGG CGGGCTTGCG
GTCAACATGC CGGCCTATGC GCTCTTCTTC ATGTTGTTCA CCATGGCGTC GATCGGCTTG
CCGGGGACGA GCGGTTTTGT CGGCGAGTTC CTGAGCCTGC TCGGTATCTA CGAAGCGTCG
AGTGTCGTCG CCTTCGTCTG TACGACCGGG ATCATCCTCG GCGCCGCGTA CATGCTTTAC
CTCTATCGCC GCGTCGTGTT CGGCGAACTG ACCAAGGACG ATGTGAAGGC GATGCCCGAT
CTCAACGTAC GCGAATGGGC GATCATGGCG CCGCTCGCCG CCGTGGCGCT GTGGATGGGC
GTCTATCCCG AAAGTTTCCT CGCGCCGATG CGCGGCGACG TGACCACGGT GGTCGCACGC
CTCGCTCCCG CGAAGCCCGC GGGCGACGCG CATCTGGCCG TCGGCAAGCC GAAGCCCGCC
GCAGTGCATG AGGAAGCCGC CCACGGATCG AGCCATGCGG GAGGCGTGCA ATGA
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| Protein sequence | MSGFPILSLM LAVPLIAAIL CLYAGDRNAR VIALAATLID FALGIVLWAS FDIGGAQWQF
TERADLFGRF QWALGIDGMA LMLIMLSVFL MPLCILASWE AIKSRVGLYM AMFLIMEVVM
IGVFMAQDLL LFYIFFEAGL IPMYFIIGIW GGANRKYAAF KFFLYTLLGS VLMLIAMIAM
IAEAGTTDIP TLLNYDFPVE MQTWLWLAFF ASLAVKMPMW PVHTWLPDAH VQAPTAGSMI
LAGVLLKLGA YGFLRFMMPM FPDASAQLMW LVFGLSMVAV VYTSLVALVQ NDMKKLIAYS
SVAHMAIVTA GLFAFNQQGI EGALIIMLSH GVVSAALFFC VGVIYDRLHT REIDRYGGLA
VNMPAYALFF MLFTMASIGL PGTSGFVGEF LSLLGIYEAS SVVAFVCTTG IILGAAYMLY
LYRRVVFGEL TKDDVKAMPD LNVREWAIMA PLAAVALWMG VYPESFLAPM RGDVTTVVAR
LAPAKPAGDA HLAVGKPKPA AVHEEAAHGS SHAGGVQ
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