Gene Sala_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1292 
Symbol 
ID4082584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1351474 
End bp1351734 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content66% 
IMG OID638009654 
Producthypothetical protein 
Protein accessionYP_616339 
Protein GI103486778 
COG category[S] Function unknown 
COG ID[COG5454] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA CCTCCGCCCT TGCGATCTTC ACGCTATTCT GGGTGTTCAG CGCCTTCTTC 
GTGCTGCCCT TCCACGGCCG CCGCTCGAGC GATGACGACG AGCCCTTGGT GGCTGGGCAG
GACCGCGGCG CCCCGGCGCG CTTTCGTCCG GGGCGGGTGG TGCTTCAGAT GACGATCGTC
GCGGCGGTGG CCTTTGTGCT CTACTTTACG GCCTATGTGA ACGGCTGGGC CGACCCCGAT
GTGTTGACCG GGCGGGCGTA A
 
Protein sequence
MKWTSALAIF TLFWVFSAFF VLPFHGRRSS DDDEPLVAGQ DRGAPARFRP GRVVLQMTIV 
AAVAFVLYFT AYVNGWADPD VLTGRA