Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1291 |
Symbol | |
ID | 4082583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1348822 |
End bp | 1351185 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638009653 |
Product | hypothetical protein |
Protein accession | YP_616338 |
Protein GI | 103486777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGGG AAAAGAAAAT CGTCGGATTG TGGCGGGAAT CCGCGGCAGG TCCGGAAGCA GACAGCGCCG CGCCGGTCGA GGCCGCCGCG GCCGCTGCCG TATCCGCACC GGACGCGGAG GGCGCGGCGG GCGATCGCGA CTGGCTGGAC ATGACGCCGC TCGACGACGA CGCCGAAGCC CGCATCGAGG GCGAAGCCGC GTCGGCATGG CGCGAGCGCG GCATACCGGC GCTCCTGATC CTTCTTGCAG TGGGATGGAC GGGATTCGCG CTCGGCGTCG CCACTGACGG CTTCGCACAA AGCCCGGCGA TCGCCGACTG GCCCGCGCAT ATTGCGACGA TCGCGATGCC GCTTGCGCTG CTCGCGCTGC TCTGGATGCT CTGGCTGCGC TCGGGTCGGT CGGAACAGGC GCGGTTCGCG CGCATCGCCG CGGCGCTGCG TGCCGAAAAT CTGGCGCTGA ATCAGTCGAT GCACTCGCTC GGCCTGCACC TCGCCGACGC GCAGAAGCAG CTTGGTGAAC AGGCGCGGAT CGTCCAGCAA CTCGGCCTCG ACACGGTGAT GCGCCTTGCT GAAAGCAGCG ACAAGCTCGC GAGCAACGCC GCGGTGATCG CCAATGCCCA CGACCAGCTC GCTCGCTCGG GCGATGTCGC GTTGCAACGG ATGGACGGTC TGCTTGCCGG GCTGCCGCGG ATCGACGATG TGGCGCAGCG GCTGGCGGTC AATTTCCGCG AGGCGGGATT GGTGGCGCAC CAGCAGGGCG CGAACCTCGA AGCCAGGCTC GCCGCGCTGG GCGAAGAGGC GGCGCGGACG GCGCAGGCCG GTCAGGCTTC GACCGAAGCG ATTCTCGAAG CGATTGTGGC GCTTCAGGAA CAGACAAAGG AAACCGAAAG CGGCCTGCTC GCCGCCTCGG CGGAGGTTAG CGGCGCGCAT GACGCCGCAC TGGCGCGCGT GACCGAGAGC GCGGCGTCGG TGCGCCGCGC GATGGCCGAC ACGCTCGCTG CGCTCTCCGC GCAAAGCGAG GAGATCTGGC GCCAGTTTGG CGAGAGCGTC GACGCCGCGG CCGCGCAGAT GGACGCCAGG CTCGCGGCGG CGCGCGAGGC CGGCGACGCG ATCGGGGCAC AATTGTCGGA GCATGCCGAT GCGAGCGACG CCCTCGCGGG GCGGATCGCC GCGCATGTCG CCGAGGTCGG CAAACAGCTG GAGACGCTCA ACGTCAACGT CGACGCCAGC ACCGGCGTCG TCGGTCGCGC GATCGACGAT ACCAAAGCGC AGCTTGCGGC CTTCATGGAG CAGGTGCAGA GCGGAAATGT TTCGGCGGCT CAACTCGTTT CGCACGCCGA ATCGTTGTTG CTCGCGCTCG ATGCGGTAAC GCGGGAGCTT GACGAAACGC TGCCGCGCGC GCTCGACCGC ATCGCCGGAC ACGGCAAGAC GACACAATCC GCCCTCGCCG AAATCCGTCC GCTGCTCGAA GCGTCCGAAC TCGTCGCGCA ATCGACGGTC TCGCACGTCC ATGCCGTGCA GGCGACGCTC CGGTCGAACG AGGAACAGAT GACGGGTCAA GCGGCGAACC AGCAGGCGCT GGCCGACCGA CTGAACGCCT CGTTCGCCGA AGCCGAAGCA TCGCTCGCGA AACTGCGCGA CGGCGCCGAA GCCTTCAGCG AACAGGGCGG CGCGCGGATG ATCGCGACGC TGGCCGAGGT TCGGGCAACC GCCGATTCGG CGGCCAACCA GGCGCGGCTG ACGCTCGAAC GGCTTGTCGA TGGCGCGCGC GAGACGATGA AGGCAACCGC GAGCGAGGCG ATCGACGCCG CCTTCCGGAC CGAAATCATG GCGCAGCTCG CCGCAATCGA GGATGCGTCG GCGCGCGCCG TCGCCGCGGC GAACAGCGCC GCCGACCGGC TGATGCGCCA GCTCGTCACG ATCATGGACG CCAGCGAGAG TGTCGAACAG CGCGTGAGCG AGGCCGAACA GGCGATCGCC GCTTCCGACC GCGACACGCT CGCCAAACAG GTCGGCGTGC TCACCGAAGC GCTCAAATCG ACCGCGATCG ACGTCACCAA GATATTGTCG AGCGAGGTCA GCGACACCGC GTGGGACGCT TACCTCAAGG GCGACCGCGG CGTCTTTGCC CGCCGCGCGG TCAAGCTGGT CGAGAACAGC GAGGTAAAGG AAATCCTGCG CCTCTATCAG AATGACGACG GCTTCCACGC CGCGGTCAAT CAGTTCATCC ATGATTTCGA GGCGATGCTG CGCCTGCTGA TCGGCGCACG CGACGGATCG GCGATCAGCG TGACCCTGCT GTCCTCCGAT ATCGGCAAGC TGTATGTGGC GCTGGCGCAG GCGATCGACC GGCTGCGGAG TTAA
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Protein sequence | MTGEKKIVGL WRESAAGPEA DSAAPVEAAA AAAVSAPDAE GAAGDRDWLD MTPLDDDAEA RIEGEAASAW RERGIPALLI LLAVGWTGFA LGVATDGFAQ SPAIADWPAH IATIAMPLAL LALLWMLWLR SGRSEQARFA RIAAALRAEN LALNQSMHSL GLHLADAQKQ LGEQARIVQQ LGLDTVMRLA ESSDKLASNA AVIANAHDQL ARSGDVALQR MDGLLAGLPR IDDVAQRLAV NFREAGLVAH QQGANLEARL AALGEEAART AQAGQASTEA ILEAIVALQE QTKETESGLL AASAEVSGAH DAALARVTES AASVRRAMAD TLAALSAQSE EIWRQFGESV DAAAAQMDAR LAAAREAGDA IGAQLSEHAD ASDALAGRIA AHVAEVGKQL ETLNVNVDAS TGVVGRAIDD TKAQLAAFME QVQSGNVSAA QLVSHAESLL LALDAVTREL DETLPRALDR IAGHGKTTQS ALAEIRPLLE ASELVAQSTV SHVHAVQATL RSNEEQMTGQ AANQQALADR LNASFAEAEA SLAKLRDGAE AFSEQGGARM IATLAEVRAT ADSAANQARL TLERLVDGAR ETMKATASEA IDAAFRTEIM AQLAAIEDAS ARAVAAANSA ADRLMRQLVT IMDASESVEQ RVSEAEQAIA ASDRDTLAKQ VGVLTEALKS TAIDVTKILS SEVSDTAWDA YLKGDRGVFA RRAVKLVENS EVKEILRLYQ NDDGFHAAVN QFIHDFEAML RLLIGARDGS AISVTLLSSD IGKLYVALAQ AIDRLRS
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