| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1284 |
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| Symbol | |
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| ID | 4082535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1340281 |
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| End bp | 1342293 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638009644 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_616331 |
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| Protein GI | 103486770 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCGC GGGGCGGATT TGTGTCACTT CGCGGAAACA AAGCGCGACC GGCAATCATC
CGCCGGGCCG ATAGAATCAC AGAATCCGCG TGTAACGAGG CAGATCTCGC CCATGGACAG
GGTGGAAAGC AGCAACGATG TTGCCGTATC ACGCCGGTCG CCCCGTGCAA TCTGTCTCAT
CTTGTGGCAG CTCGCCCGGT CCGACACCAG GCCCGGCTTG CTTGCGGAAG CATCGCGACG
GGTCCGCGCC GATTGCCAAG GCGGCGCCCA TTCGCTAACC GGCGCGCAAC TCTCCCGGCC
GCCAATGCGG CCCAGCCATT ACCGGAGCAT TTCATGGCCG CCCAATATAG TTTCGTGATG
AAGGGTCTGA CCAAGACCTA TCCCGGCGCG CAAAAGCCGA CGCTCAACAA TCTGAGCCTG
CAATTCTATC CCGACGCCAA GATCGGCATC GTTGGTCCGA ACGGTACCGG CAAGTCGACG
CTGATGAAGA TCATGGGCGG GATAGACAAG GATTTCACCG GCGAGGCATG GCCCGGCGAC
GGCATTACCG TCGGCTATCT GGCACAGGAG CCGCAGCTCG ACCCGACCAA GACCGTCAAG
GAAAATGTCA TGGACGGCGT GCGTCCCGTC GCCGACATGA TGGATCGTTT CAACGAGATC
AGCGCGCTGA TGGCCGATCC GCCCGCCGAC GCCGATTTCG ACGCGCTGAT GGAGGAAATG
GGCACGCTCC AGGAAAAGAT CGACGCGGTC GACGGCTGGA CGCTCGACAA TCAGCTCGAA
ATCGCGATGG AGGCCCTCCG CTGCCCGCCG GGCGACTGGA GCGTCGAAAA TCTGTCGGGC
GGCGAAAAGC GCCGGATCGC GCTCACCCGT CTGCTGCTCG AAAAGCCGTC GATCCTGCTG
CTCGACGAAC CGACCAACCA CCTCGACGCC GAAAGCGTCG CCTGGCTCGA AAAGCATCTG
GTCGACTATC CCGGCAACGT CATCCTCGTC ACCCACGACC GCTATTTTCT CGACAATGTC
GTGAACTGGA TCCTCGAACT CGATCGCGGC CGCTACTTCG TCTACGAGGG CAATTATTCG
ACCTATCTGG AAAAGAAGGG GAAGCGCCTC GAACAGGAAG CGCGCGAAGA CCAGGGCCGC
CAGAAGGCGA TCAAGGACGA GCTCGAATGG ATCCGGCAGT CGCCGAAGGC GCGTCAGGCC
AAGTCGAAGG CGCGTATCAA ATCGTTCGAC CAGCTCGTCG AGGCGCAGGA AAACCGCGCT
CCCGGCAAGG CGCAGATCGT CATCCAGGTG CCCGAACGCC TCGGCGGCAA GGTGATCGAG
GTCAACAATA TCTCGAAGGC CTATGGCGAC AAGCTGCTCT TTGAGGATTT GTCCTTCACC
TTGCCGCCGG GCGGCATCGT CGGGGTCATC GGTCCGAACG GCGCGGGCAA ATCGACCTTG
TTCAAGCTGA TCACCGGACA GGAACAGCCG GACAGCGGCA GCATCAGCAT CGGCGACACG
GTGCGCCTCG GCTATGTCGA CCAGAGCCGC GACGCGCTCG ATCCGAACAA GAATGTCTGG
GAAGAGATTT CGGGCGGCCA CGACATGATG TCGATCGGCA AGCACGAGAT GCAGACACGC
GCCTATGTCG GCGCCTTCAA CTTCAAGGGC ACCGACCAGC AGAAGAAGGT CGGCCAGTTG
TCGGGCGGCG AACGCAACCG CGTTCATATG GCGAAGATGC TGAAACAGGG CGGCAACGTC
CTGCTGCTCG ACGAACCGAC CAACGATCTC GATACCGAAA CGCTCGCCGC GCTCGAAGAG
GCGCTCGAAA ACTTCGCGGG CTGCGCCGTT GTCATCAGCC ACGACCGTTT TTTCCTCGAC
CGCCTCGCGA CGCACATCCT GGCATTCGAG GGCAACAGCC ATGTCGAATG GTTCGAGGGC
AATTTCGAGG CTTATGAGGA GGACAAGATC CGCCGCCTCG GCGAAGGCGC GACGCGCCCG
CACGCGACGA CGTACAAAAA ATTGTCACGC TGA
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| Protein sequence | MGPRGGFVSL RGNKARPAII RRADRITESA CNEADLAHGQ GGKQQRCCRI TPVAPCNLSH
LVAARPVRHQ ARLACGSIAT GPRRLPRRRP FANRRATLPA ANAAQPLPEH FMAAQYSFVM
KGLTKTYPGA QKPTLNNLSL QFYPDAKIGI VGPNGTGKST LMKIMGGIDK DFTGEAWPGD
GITVGYLAQE PQLDPTKTVK ENVMDGVRPV ADMMDRFNEI SALMADPPAD ADFDALMEEM
GTLQEKIDAV DGWTLDNQLE IAMEALRCPP GDWSVENLSG GEKRRIALTR LLLEKPSILL
LDEPTNHLDA ESVAWLEKHL VDYPGNVILV THDRYFLDNV VNWILELDRG RYFVYEGNYS
TYLEKKGKRL EQEAREDQGR QKAIKDELEW IRQSPKARQA KSKARIKSFD QLVEAQENRA
PGKAQIVIQV PERLGGKVIE VNNISKAYGD KLLFEDLSFT LPPGGIVGVI GPNGAGKSTL
FKLITGQEQP DSGSISIGDT VRLGYVDQSR DALDPNKNVW EEISGGHDMM SIGKHEMQTR
AYVGAFNFKG TDQQKKVGQL SGGERNRVHM AKMLKQGGNV LLLDEPTNDL DTETLAALEE
ALENFAGCAV VISHDRFFLD RLATHILAFE GNSHVEWFEG NFEAYEEDKI RRLGEGATRP
HATTYKKLSR
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