Gene Sala_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1283 
Symbol 
ID4082534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1339832 
End bp1340275 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content66% 
IMG OID638009643 
Productthioesterase superfamily protein 
Protein accessionYP_616330 
Protein GI103486769 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGG GAGAAGGCAT CTCGTCGAGC GTGATCCGCA TGGACGCGGA TGCGCTCAAC 
ACCTTCATGG CAGAGGCCTT TCCCCAGTCG GAGCCGGGAT CGCGCGGCTA TGTGGTTTCG
GCAGCGCCGG GCCATGTGCA GGCGCGGATG GACCCGAGCG ACAAGGCGCT CCGTCCCGGC
GGGCTGATTT CGGGGCCGAC GCAGATGGGT TTTGCCGACA TGGCGGCATA TGCGCTGGTG
CTGGCCCACA TCGGGCCCGT CGCGATGGCG GTGACAAGCG CGCTCAACTA CCAGTTTCTG
CGCCCGTGCC GTCCCGGCTC ACTGTTCGCC GACGCACAAA TGCTGCGCCT CGGCAAACGG
CTCGCGGTCA TGGACGTGCG GATATGGACC GACGATCCGC TAAAGCCGGT CGGGCAGGCG
AATGTGACCT ACGCGATTCC CTGA
 
Protein sequence
MGEGEGISSS VIRMDADALN TFMAEAFPQS EPGSRGYVVS AAPGHVQARM DPSDKALRPG 
GLISGPTQMG FADMAAYALV LAHIGPVAMA VTSALNYQFL RPCRPGSLFA DAQMLRLGKR
LAVMDVRIWT DDPLKPVGQA NVTYAIP