Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1283 |
Symbol | |
ID | 4082534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1339832 |
End bp | 1340275 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009643 |
Product | thioesterase superfamily protein |
Protein accession | YP_616330 |
Protein GI | 103486769 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAGG GAGAAGGCAT CTCGTCGAGC GTGATCCGCA TGGACGCGGA TGCGCTCAAC ACCTTCATGG CAGAGGCCTT TCCCCAGTCG GAGCCGGGAT CGCGCGGCTA TGTGGTTTCG GCAGCGCCGG GCCATGTGCA GGCGCGGATG GACCCGAGCG ACAAGGCGCT CCGTCCCGGC GGGCTGATTT CGGGGCCGAC GCAGATGGGT TTTGCCGACA TGGCGGCATA TGCGCTGGTG CTGGCCCACA TCGGGCCCGT CGCGATGGCG GTGACAAGCG CGCTCAACTA CCAGTTTCTG CGCCCGTGCC GTCCCGGCTC ACTGTTCGCC GACGCACAAA TGCTGCGCCT CGGCAAACGG CTCGCGGTCA TGGACGTGCG GATATGGACC GACGATCCGC TAAAGCCGGT CGGGCAGGCG AATGTGACCT ACGCGATTCC CTGA
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Protein sequence | MGEGEGISSS VIRMDADALN TFMAEAFPQS EPGSRGYVVS AAPGHVQARM DPSDKALRPG GLISGPTQMG FADMAAYALV LAHIGPVAMA VTSALNYQFL RPCRPGSLFA DAQMLRLGKR LAVMDVRIWT DDPLKPVGQA NVTYAIP
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