| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1279 |
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| Symbol | |
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| ID | 4082530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1337201 |
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| End bp | 1337758 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009639 |
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| Product | CinA-like protein |
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| Protein accession | YP_616326 |
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| Protein GI | 103486765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.270963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCCCG ACGCCGAATC GCGCCTCATC GCGCGTGATG ACCTCGCCGC GAGCGTGCTC
GCCCAGAATC GCGCGGCCGG GCGCAAGATC GCGGTCGCCG AAAGCTGTAC CGGCGGCATG
GTGGCCGCGG CGCTCACCGA CATTGCAGGA TGTTCGGACG TTTTTTCCGC CGGTTTCGTC
ACCTATTCGG CCGATGCCAA GAAAAGACAG CTCGACGTCA GCAGCGAGAT TCTCGAAACA
TTCGGCGAAG TCTCGCTGGC GACCGCCTGG GCGATGGCGG CCGGGGCGCT GGCGAACAGC
GACGCCGATG TCGCGGTCGC GATCACGGGG ATAGCCGGGC CCAGCGGCGG CTCCGAAAAG
AAGCCGGTGG GCCTCGTCGT CTTCGCGCGC GCGCTCCGCG GGCAGGATCC CGACGATTAT
TTCACCCAGC GCATCCAGTT TGAATCGACC GACCGCGGAG CGATCCGCCA TGCGGCAACC
TTGTTTGCGC TCGAGCTGCT TCAGCCCGAA AAGGACGCGC TGCGTCCTTC GGAGGATGTC
GCGCTCCCCG CACCGTAA
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| Protein sequence | MQPDAESRLI ARDDLAASVL AQNRAAGRKI AVAESCTGGM VAAALTDIAG CSDVFSAGFV
TYSADAKKRQ LDVSSEILET FGEVSLATAW AMAAGALANS DADVAVAITG IAGPSGGSEK
KPVGLVVFAR ALRGQDPDDY FTQRIQFEST DRGAIRHAAT LFALELLQPE KDALRPSEDV
ALPAP
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