| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1274 |
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| Symbol | |
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| ID | 4082525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1330045 |
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| End bp | 1332366 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009634 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_616321 |
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| Protein GI | 103486760 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.18473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGG AATGTCGTAA TGAAGCAACA ATGACGCCTG TGGCTGCCCC GACCTTCGAC
ATGGATTCGG ACAGATCGAA CGCGCGTGCG GGTTTCTGGC GCTTCGGCGT TCCCGAATAT
TATGCGCTCG CGGCCATGGT CAGCATCGCG ATCGCCACCT ATATTTTCGT GACCGGCGAC
GCGCAGAGCG AGCGGCTTCT CACGCCCGCA CTGGTGGCCG CGATCATGGT CGCCAATCTG
GTTCCGGCGA TGGCGTTGAT CGTACTGATC GGCAGCCGCG TGGCGCGCAC GCGCGCTGTG
CGGTCGATGG CGGGAGGCAA CGGGCGCCTG CACGTTCGCC TCGTCGCCCT CTTTTCGCTG
ATTGCGGCAA CGCCGACATT GCTCGTCGTG ATTTTCGCTT CGCTGCTCTT CCAGTTCGGT
GTCGATTTCT GGTTTTCGGA CCGCTCGCGC GGGATGTTCG AGAATGCGGC GAACCTGGCC
GAGGGTTATT ATCAGGAAAA TCAGCGTCAG GTCGGCGCAA ACACCTTTGC GATGGCGACC
GATCTCGGCA TGCGGCTGCG GCAATATCCG ATCGATGCAC CGGGATTTAA CGACTATTAT
TTTCAACAGG TTGTCGTCCG TAGTTTGAAT GAATCGGCGA TTATCGAGAT CGGACGCGAT
GGCGTTGCGC GGACGGCGAC GGCGATCGAC CCAGACGAAC GGCCCGCGAC GAGCCGCCTC
ACTCCGCAAA TGATCGCGCG TCTCGACGCG GGCGAAGATG TCGTTGTCGT GCGCCGTTCG
GACCGTATTG AGGCTGCGGC CCGCTTGCCG GGCACCGACC GCGCCTTTGT TTATGCGTCG
CGCGACACCA ATGTACCGGG TTTTCAGCAA TCGGCGCGGG CCAGCGCGGT GCTGGCCGAT
TACAATCAGC TCTTTGATCG CTCGCAGATG CTTCAGTTGC AGTTCAACGG CGCGCTTTAC
CTCGGCTCGC TGCTCCTGCT CGCGCTGGCC GTGATCGCTG CGATCGTGGT CGCCGACCGC
ATCGTCCGGC CGCTCGGCAC GCTGATCGGC GCGACGCGGA CCGCGGCGGG CGGCGACCTG
TCGGTTCGCG TAACGCCCCC CGAGCGCGAC GACGAGATTT CGGTGCTGAC GCGCGCATTC
AACCGGATGA CCGAGCAGCT CGAGCGGCAA ACGCGTGCGC TCGTCAATGC GAACGAGCAG
CTCGAGGCGC GGCGCAGCTT TATCGAGGCG GTGCTGAGCG GCGTGTCTTC GGCGGTGGTA
TCGGTCGATG CCGACCGCCG CATCCTGCTC GCCAATGCCG CGGCGGAAAG GCTCATCGGT
CGCTCGGCCG ACGAGCTGAC GGGACTTCTG CTGGACGAGG TCGCGCCCGA GCTGGCGCAA
TTGCTGACCG GGAACGAGCG CGAGGCGATC GTCCAGCTTG TGCGCAAGGA CAGCGAACCG
GCGACACTCG CGGCGAAGGC GGTGGCGCAG GGTGACGGCT TCGTCCTCAG TTTTGAAGAC
ATAACGCAGC AATTGCTCGA TCAGCGTCGC GCCGCCTGGT CGGACGTTGC GCGCCGGATC
GCGCACGAGA TCAAGAATCC GCTTACCCCG ATCCAGCTTG CCGCCGAGCG GTTGCAGCGC
CGTTTCGGCG ACCGTGTCGA GGGCGATGCG CCGACGTTCC GCAAGCTGAC CGACACGGTG
ATCCGCCAGG TTCACGACAT GCGCCGCATG GTCGACGAGT TTTCCAGCTT TGCGCGAATG
CCCAAGCCGA CCTTCGGCGT CGAGGATGTA CGAGACATCT TGCGGCAGGC GGTGTTCCTG
TTCGAGGTTG CCAAGCCCGA CATCGCCTTC ACGGTCAGGA CGCCTGCCGA GGTCGAACCG
CTGGTGTGCG ACCGTCGCCT GCTGTCGCAA GCCATAACGA ACATCGTCAA GAACGCTGTC
GAAGCAATTG AAGAAAAATA TAAAAACTCT GACGCAACGG CTGTTGGCTC GATCCGGGCG
GAACTGGAGA TTGGCGCGCA CGATGCGATC GTGATCCGCG TCACCGACGA CGGTATCGGG
CTACCCGAAG CGCGCGACGC GATCGCCGAA CCCTATATGA CGACGCGGCA GGGCGGGACG
GGCCTCGGCC TCGCCATCGT CAAAAAGATC GTCGAGCAAC ATTATGGCGA ACTGGAGTTC
GCCGACAATC CGGCGGGGCA GGGGACGTGC GTAACCCTGA CGCTGCACCC CGAACGGCTG
CGGCCGCTGG CCGGGCAGGG CGACGACAAT GGTCCGGGCA AGAGCGAGAC GGTTCCGGGA
CGCATCCGCA ACCGGAAGGA CAGGGAAGAC CATGGCGCTT GA
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| Protein sequence | MQQECRNEAT MTPVAAPTFD MDSDRSNARA GFWRFGVPEY YALAAMVSIA IATYIFVTGD
AQSERLLTPA LVAAIMVANL VPAMALIVLI GSRVARTRAV RSMAGGNGRL HVRLVALFSL
IAATPTLLVV IFASLLFQFG VDFWFSDRSR GMFENAANLA EGYYQENQRQ VGANTFAMAT
DLGMRLRQYP IDAPGFNDYY FQQVVVRSLN ESAIIEIGRD GVARTATAID PDERPATSRL
TPQMIARLDA GEDVVVVRRS DRIEAAARLP GTDRAFVYAS RDTNVPGFQQ SARASAVLAD
YNQLFDRSQM LQLQFNGALY LGSLLLLALA VIAAIVVADR IVRPLGTLIG ATRTAAGGDL
SVRVTPPERD DEISVLTRAF NRMTEQLERQ TRALVNANEQ LEARRSFIEA VLSGVSSAVV
SVDADRRILL ANAAAERLIG RSADELTGLL LDEVAPELAQ LLTGNEREAI VQLVRKDSEP
ATLAAKAVAQ GDGFVLSFED ITQQLLDQRR AAWSDVARRI AHEIKNPLTP IQLAAERLQR
RFGDRVEGDA PTFRKLTDTV IRQVHDMRRM VDEFSSFARM PKPTFGVEDV RDILRQAVFL
FEVAKPDIAF TVRTPAEVEP LVCDRRLLSQ AITNIVKNAV EAIEEKYKNS DATAVGSIRA
ELEIGAHDAI VIRVTDDGIG LPEARDAIAE PYMTTRQGGT GLGLAIVKKI VEQHYGELEF
ADNPAGQGTC VTLTLHPERL RPLAGQGDDN GPGKSETVPG RIRNRKDRED HGA
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