| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1273 |
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| Symbol | |
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| ID | 4082524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1328670 |
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| End bp | 1330055 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009633 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_616320 |
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| Protein GI | 103486759 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.321993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTG ATATTCTGAT CGTCGATGAT GAACGCGACA TATGCGAGCT CGTCGCTGGG
GTCATGGAAG ACGAAGGCTA TGAAGCGCGG ACCGCGTCGG ACAGCGATTC GGCGCTCGAA
GCTATCCGGC AGCGGCGCCC GTCGCTGGCG CTGATCGATG TCTGGCTCCA GGGCTCACGG
CTCGACGGAT TGGGACTTGT GGAGGCGATC AAGGCGTTCG ACCCGACGCT GCCGATCATC
GTCATCTCGG GGCATGGCGG ACTCGACACC GCGGTCGCCG CGATCCGCCG CGGCGCATTC
GACTTCATCG AAAAGCCGTT TGAAGCCTCG CGCCTGCTCC ACCTCGTCGC GCGCGCGACC
GAGAACGAAC GGCTGAAGTT TGAATATGAA CAACTCCGCG AAAAGGCAGG TCCGGCGGAA
GAACTCACGG GCAACAGCGC CGCGATCAAC AATGTCCGCG CCACGCTGAA GCGCGTCGCA
GGGACGGGAA GCCGTGTTCT CATCACAGGC GCGCCCGGTG TCGGCAAGGA GGTGGCCGCC
CGCGTTCTGC ACGGCTGGAG CGGGCGCCAC AATGCGCCGT TCCGGGTGAT CTCGTCGGCG
CGGATGGATC CCGAGACGGT CGAGCTTGAG CTTTTCGGTT CGGAGGCCGA GGATGGCTCG
ATCCGAGTCG GCCTTCTCGA ACAGGCGCAT GGCGGCACGC TGTTCCTTGA TGAAGTCGCC
GACATGCCGC TGACAACGCA GGGCAAGATA CTGCGGGTGT TGACCGACCA GAGTTTCACC
CGCGTGGGAG GACGGACGAT GATCCGCGTC GACGTCCGTA TCATTTCCGG CTCGGCACGC
GACCTGACCG TCGAGATCGC CGAAGGGCGC TTTCGCGAGG ATCTATACTA CCGGCTCAAC
GTCGTTCCGG TGCATATTCC GTCGCTGCGC GAAAGGCGCG ACGATATCGC AAGCCTGTGC
GACCATTTCG TCCGTCGCTA TGCGGCCGAC CGCCGGGTTC CGCCGCCGGA GATCAGCGCC
GAAGCGATGG CGGCGCTTCA GGCGCACGAC TGGCCGGGGA ATGTGCGCGA ACTGCGCAAT
GTGATCGAAC GAGTGATGAT TCTGGCGCCA AGCGACCGGC TGGGCCGCAT CGATGCGGAC
ATGCTGCCCG CCGAACTGGT ACGGGGAGGC GCCGATATTT TGCCCAGTTC CGAGTCCATC
ACCACCATTC CGCTCAAGGA AGCGCGCGAG AATTTCGAGC GCGAATATCT GCGCATCCAG
ATCAACCGTT TTTCGGGCAA TATCTCGCGT ACGGCGAGTT TCATCGGCAT GGAGCGCTCG
GCGCTGCACC GCAAACTGAA ACTTTTGGGG CTCACCGAAA GTTCGGATAA TGAAAGTCCG
GCTTGA
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| Protein sequence | MALDILIVDD ERDICELVAG VMEDEGYEAR TASDSDSALE AIRQRRPSLA LIDVWLQGSR
LDGLGLVEAI KAFDPTLPII VISGHGGLDT AVAAIRRGAF DFIEKPFEAS RLLHLVARAT
ENERLKFEYE QLREKAGPAE ELTGNSAAIN NVRATLKRVA GTGSRVLITG APGVGKEVAA
RVLHGWSGRH NAPFRVISSA RMDPETVELE LFGSEAEDGS IRVGLLEQAH GGTLFLDEVA
DMPLTTQGKI LRVLTDQSFT RVGGRTMIRV DVRIISGSAR DLTVEIAEGR FREDLYYRLN
VVPVHIPSLR ERRDDIASLC DHFVRRYAAD RRVPPPEISA EAMAALQAHD WPGNVRELRN
VIERVMILAP SDRLGRIDAD MLPAELVRGG ADILPSSESI TTIPLKEARE NFEREYLRIQ
INRFSGNISR TASFIGMERS ALHRKLKLLG LTESSDNESP A
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