Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1263 |
Symbol | |
ID | 4080278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1315545 |
End bp | 1316756 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009623 |
Product | nitrate transporter component, nrtA |
Protein accession | YP_616310 |
Protein GI | 103486749 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGG AAAGCTTTCG CATCGGCTTC CTGCCGTTGG TCGACGCCGC GCTGCCGATT CTGGCGCACG AGATGGGGTT TGCCGGGCGC GAGGGACTGC GTATCGAACT GGTTCGCGAC ATGACCTGGG CGACGGTGCG CGATCGGCTG CTCTATGGGC ACACCGACGC CGCACACATG ATTGCGCCGC TGGCGATCGC GACGACGCTT GGGCGTGACC GGCCGCCGGT ACGGCTCGCG GTGCCGTTCG TTCTAGGGCT CAATGGCAAT GCAGTGACCG TCTCGACCCG TCTCGCCGAT GAAGCGGGGC TTGGCCGACA ACTCGGCGAT CCCGTCCAGT TCGGCCAGGC TTTGCGGGTG ATTGCGGCTG CGCGCAAGGC GGCCGGCAAT CCGCTGCGTT TCGGCGTCGT CCATCGCTAT TCGAGCCATA ATTACATGTT GCGCTATTGG CTCGCAGGCG TCGGCATCCA TCCCGACGCC GACGTCACGA TCGTCGTCAC CAGCCCCCCC TTCGCCGCCG ACGCGCTTGC TGCGGGCGAA GTCGACGGCA TATGTGTCGG CGAGCCGTGG AACTCGATCG CGGTCGACCG CGGGGTCGGG CAAATTGCGC TGGCAACCGC GCAGATCTGG CGGCGCGGAG TCGAAAAGGT GCTCGCGCTG CGCGAATCGG TGGTCGACGA ACGGCGCGAC GCCGTCGAAG CACTCGTTCG AGCACTCCAT GCCGCGGCGG CGCAGTTTGT CATGCCCGAC GCCACCGTGG AAAGCGCCGA CATATTGGCG CGTCCCGAAT ATCTGGACGC GCCACGCGAT GCGGTGCTGC GCGCGATCAC CGACCGCATT CGCGTCGTCC CCGGCGGCGA GCCGATCCAC TATCCCGATT TCATGTTTCA GTATCGCGAG GCCGCGAACT TCCCGTGGCG CAGTCAGGCG GCCTGGCTTT ATTCGCAAAT GATCCGCTGG GACAGCAACC CCTTCTCCGA AGCCGATGCC GCGACGGCTT CTGCGGTCTT CCGTCCCGAC ATCTACCGCG CTGCGCTGGC CGGCACCGGC GCGCCGCTGC CCGGCGCATC GTCAAAACTC GAAGGCGGGC TCGACGAACC CATCGGCGCG GGTTCGGTCC AGGGCCGTCT GACCCTCGGT AGCGACCTTT TTTTCGACGG ACGTGCCTTT GATCCCGACG ATATCCAGTC CTATCTTGCT GGACTGGAAT GA
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Protein sequence | MMTESFRIGF LPLVDAALPI LAHEMGFAGR EGLRIELVRD MTWATVRDRL LYGHTDAAHM IAPLAIATTL GRDRPPVRLA VPFVLGLNGN AVTVSTRLAD EAGLGRQLGD PVQFGQALRV IAAARKAAGN PLRFGVVHRY SSHNYMLRYW LAGVGIHPDA DVTIVVTSPP FAADALAAGE VDGICVGEPW NSIAVDRGVG QIALATAQIW RRGVEKVLAL RESVVDERRD AVEALVRALH AAAAQFVMPD ATVESADILA RPEYLDAPRD AVLRAITDRI RVVPGGEPIH YPDFMFQYRE AANFPWRSQA AWLYSQMIRW DSNPFSEADA ATASAVFRPD IYRAALAGTG APLPGASSKL EGGLDEPIGA GSVQGRLTLG SDLFFDGRAF DPDDIQSYLA GLE
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