| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1260 |
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| Symbol | |
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| ID | 4080275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1313044 |
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| End bp | 1313820 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009620 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_616307 |
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| Protein GI | 103486746 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0762815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTCG ATTCGCACTG TCACCTCAAT TACAAGGGCC TCGCCGAGCA GCAGGACGAG
GTGCTGGCGC GCGCACGAGA GCGGGGCGTG ACCGCGATGC TCAACATCGC GACGCGCGAA
AGCGAGTGGG ACGATGTGCT CGCCGCCGCC GAGGCGAACG ACGATGTGTG GGCGAGCGTC
GGCATACACC CGCACGACGC CGACCAGCAT CCCGACGTCG ATACGGCCAA GCTGATCCAG
CGCGCCGCGC ATCCGCGGGT GATCGGAATC GGCGAGACCG GGCTCGACTA TTACTACGAC
AAGAGCGATC GCACCCGGCA ACAGGACAGC TTTCGCCGCC ATATCCATGC GGCGCAGGCC
ACGGGCCTGC CGGTGATCGT GCATATGCGC GACGCCGAGG CCGACACGCT GGCACTGCTC
GGCGAGGAAA TGGCAAGGGC AAGCTTTCCC GGTGTGATCC ACTGCTTCAC CGCAAGCGAC
GCTTTTGCGC GCAAAGCGCT CGATATCGGC CTTTATATTT CGATCTCCGG CATTGTGACG
TTCAAAAACG CCACCGACTT GCAGGCAACG GCCAAATGGC TGCCGCGGGA GCGGTTGCTG
GTCGAAACCG ATGCCCCTTT CCTCGCCCCG GTGCCGCATC GCGGCAAGAC CGGCGAGCCG
GCGTTCGTCG CCGATACGCT GGCGTTTCTT GCCGATCTGC GTGACGAGGA TCCGGATGCG
CTTGCAGCCG CGACAAGCGC CAATTTCTAT TCGCTTTTCA ACAAGGCGGC GGCATGA
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| Protein sequence | MLVDSHCHLN YKGLAEQQDE VLARARERGV TAMLNIATRE SEWDDVLAAA EANDDVWASV
GIHPHDADQH PDVDTAKLIQ RAAHPRVIGI GETGLDYYYD KSDRTRQQDS FRRHIHAAQA
TGLPVIVHMR DAEADTLALL GEEMARASFP GVIHCFTASD AFARKALDIG LYISISGIVT
FKNATDLQAT AKWLPRERLL VETDAPFLAP VPHRGKTGEP AFVADTLAFL ADLRDEDPDA
LAAATSANFY SLFNKAAA
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