| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1256 |
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| Symbol | |
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| ID | 4080271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1308924 |
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| End bp | 1309745 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638009616 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_616303 |
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| Protein GI | 103486742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.317973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGG ACATGGAGTC GGGCGCGATC CTTTTTTCGC GGGGTGCCGA CAAACGCTTC
GCCCCGGCTT CGATGGCGAA GGTGATGACC GCCTATGTCG TGCTTGATCT TTTAAAAACG
CGCGAACTGC GGCGCGACAC GACATTCACG GTCAGCGACG CCGTATGGAG GAAATGGAAC
AGCAGTACCG GTGGGTCGAC GATGTTCCTC AGTCCCGGCG AGAAACTGTC GGTTGACGAT
CTGCTGAAGG GTTTGATCAC CGTATCGGCG AATGATGCGG CGGCGGTTCT TGCCGAAGGA
ATCGATGGCA GCGAAGAAGC TTTTGTCAGG CGAATGAATA AGGTGGCGGC TGATATTGGT
ATGGCGTCGA GTCATTTTGG CACGCCCAAC GGCTGGCCGG ACGGCGGCGT CACAAAGGTC
AGCGCCGCTG ACCTCATCAC GCTTGCCGAT CGACTTATCC GTGATCATCC GGACGGTTAT
GCGCGTTATT TTTCAATCCC GAAACTCCAG CATGGCGTCG CGCCCGACGG ACGACCGATC
GTGCAACCGA ACCGCAACCC GATTCTCGAC CGGGTTGACG GCGCCGATGG CCTCAAAACG
GGGCATACCC GCGAGGCAGG CTATTGCTTC CTGGGGTCGG CCGAACGCGA TGGCCGCCGG
CTGATCATGG TCGTTGCCGG TCTGCCCAGC GCAAATGCGC GGCGGGAGGA GGCGCAAAGG
CTGATGGACT GGGGGTTCGC CGCCGCAGCG CATCGAATGG CAGCCGAAAC CCGGCGTGGG
AGCGCCTCAA CGAGCGTGGC CGCGGGCGCG ACGCATAGAT GA
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| Protein sequence | MLKDMESGAI LFSRGADKRF APASMAKVMT AYVVLDLLKT RELRRDTTFT VSDAVWRKWN
SSTGGSTMFL SPGEKLSVDD LLKGLITVSA NDAAAVLAEG IDGSEEAFVR RMNKVAADIG
MASSHFGTPN GWPDGGVTKV SAADLITLAD RLIRDHPDGY ARYFSIPKLQ HGVAPDGRPI
VQPNRNPILD RVDGADGLKT GHTREAGYCF LGSAERDGRR LIMVVAGLPS ANARREEAQR
LMDWGFAAAA HRMAAETRRG SASTSVAAGA THR
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