| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1254 |
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| Symbol | |
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| ID | 4080269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1306740 |
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| End bp | 1307804 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009614 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_616301 |
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| Protein GI | 103486740 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.300933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA CTAGCATTTT CATAATACGC AAATATTTCG TACTTTCAGC GGCAATACTG
GGGGCGTGGA TCGTTGCTGC CCAGGCGCCG CTCCATGCGC AGAGCGCCGA TGCCGGGTTC
GACGCCTATG TCCAGTCGCT CTGGCCGAAA GCGCAGGCGC GTGGCGTGTC GCGCGCGACG
TTCGACCGGG TGACCGCCGG ACTGCGCTAC AATAGCCGGG TGGTGGCGCT CGACCGCGAC
AATCTGGGAT CGCCGCCCAG CCCGAACACA CCGATACCTG CTTTCGCGCC CTATAAGGCC
CGGCACGTCG ATGCCGCGCG CATCAACGGC GGGCGCCGCG TCCACGACCG CCTGCTGCCG
CTGCTCGCGC GCATCGAGGC ACGAACGGGT GTGCCGACGA GCATCATGAT CGCAATTTAC
GGGCATGAGA CCGCCTATGG CCAGGTCACG GGCAGCTTCG ACCTGCCCGA AGCGCTCGCG
ACGCTGGCGT ATGAGGGACG CCGACGCAGC CTGTTCGAGC CCGAGCTGAT CGCGACGATG
GTGATGGTCG AACGCGGCGT GCCGCGCGAT GTGCTGAAGG GGAGCTGGGC CGGCGCCTTC
GGTTATCCGC AGTTCCTCCC TTCGGTCTAT CTGCGTGTCG CCGAGGACGG CGATGGCGAC
GGCGTGGCGC GGATATGGTC GAGCGAGGCC GATGCGATCG AGTCGATCGG CGCCTATCTG
CGCAACGCGG GCTGGCGCGC GGGTCAGCCA TGGGGCGTTG CGGTCAACGT TCCGGCGACT
TTCGATCGAG CCGCTGTTGC CAACCGCCTG ACCCCCACGC GCTGTCCGCG CGTGTTCGAG
CGTCACAGCC GCTGGCGCTC GATGGCCGAG TGGCGCGCCG CCGGGCTTCA GCCGGTCAGT
GGGCGCTGGC CCGACGACGA TGTTCAGGCG ACCTTGCTCG AACCCGACGG GCCGGGGCGG
ACCGCTTATT TGCTCACCGG TAACTATCGT GCGATACTGG ACTATAATTG TTCCAATTTT
TACGCATTGT CTGTGGGATT GCTGGCGGAT GAAATCGATC GTTAG
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| Protein sequence | MTQTSIFIIR KYFVLSAAIL GAWIVAAQAP LHAQSADAGF DAYVQSLWPK AQARGVSRAT
FDRVTAGLRY NSRVVALDRD NLGSPPSPNT PIPAFAPYKA RHVDAARING GRRVHDRLLP
LLARIEARTG VPTSIMIAIY GHETAYGQVT GSFDLPEALA TLAYEGRRRS LFEPELIATM
VMVERGVPRD VLKGSWAGAF GYPQFLPSVY LRVAEDGDGD GVARIWSSEA DAIESIGAYL
RNAGWRAGQP WGVAVNVPAT FDRAAVANRL TPTRCPRVFE RHSRWRSMAE WRAAGLQPVS
GRWPDDDVQA TLLEPDGPGR TAYLLTGNYR AILDYNCSNF YALSVGLLAD EIDR
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