| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1251 |
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| Symbol | |
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| ID | 4080322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1303230 |
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| End bp | 1304759 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009611 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_616299 |
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| Protein GI | 103486738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.539956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACA TGGACCTACT CAGTGTGATC CGCCGGTGGC ATTTCCGCCA AGGCATGGCC
ATTCGTGAGA TCAAGCGGCG GACCGGCTTA TCACGCAACA CGATCCGCAA ATATCTGCGA
GCAGACGCGG TAGAGCCGGT GTTTAAGGTT CCCGACCGGC CGAGCAAGCT GGACCCGTTT
TCCGAGAAGC TGACAGGTTG GCTGCGCGTG GAGTCGGGCA AATCGCGCAA ACAGAAACGT
ACGGCCAAGC AGCTTTACGC TGATCTCGTC ACTTTGGGCT ATGACGGCTC GTATGCTCGC
GTGGCGGCCT TTGCCCGCGA TTGGAAGCGC GACCGCCAGT ATGAGCAGCA AACCAGCGGA
CGCGGGACCT TCGTGCCGCT GGTTTTCCAG CCTGGCGAAG CCTTCCAGTT CGATTGGAGC
GAGGATTACG CCGTGCTGGG TGGCAAGCAG GTCAAGCTGC AGGTGGCCCA TACCAAGCTA
TCACACAGCC GGGCCTACAT CGTTCGGGCC TATCTGTTGC AGACGCATGA GATGCTGTTC
GACGCCCTGA CGCAGGCATT CCGAGTGCTG GGCGGCATTC CCCAACGCGG GATCTTTGAT
AATATGAAGA CGGCGGTCGA CAAGATCGGC CGTGGTAAGG CGCGCCAAGT CAACGCCCGG
TTCGCCGCCC TGGCCAGCCA TTATCTATTC GAAACAGACT TCTGCAATCC AGCATCGGGC
TGGGAAAAGG GACAGGTCGA GAAGAACGTT CAGGATGCCC GTCACCGTCT GTGGCAGCCC
ATGCCCAGCT TCCCAGATCT TGCAGCTCTC AATGCCTGGC TTGAGGAACA ATGTGTCGCG
CAGTGGGCAG AAATCCAGCA CGGCACATTA CCTGGCACCA TCGCCGATGT GCACGCCGAA
GAGGTAATCA GCTTGATGCC CATGGGGAGG CCCTTCGATG GCTTCGTCGA GCAGACCAAG
CGCGTGTCGC CCACCTGCCT AATCGCCTTC GAGCGCAACC GTTACAGTGT GCCAGCCTCC
TTTGCCAATC GGCCCGTCAG CCTGAGAGTT TACCCCGAGC GGCTTGTCAT CGTCGCGGAA
GGACAAGTCT TGTGCGAACA CGAGCGGATC ATTGACCGGT CCCATCAGAA GCCGGGACGC
ACGATCTATG ACTGGCGCCA CTATCTGGCT GTCGTTCAGC GCAAGCCCGG CGCCCTGCGC
AATGGTGCGC CATTCCTTGA GATGCCCGAG GCATTCCGCC AGTTGCAGAC CCAACTGCTC
AAGCGGCTCG GCGGTGACAA GGAGATGGTT GAGATCCTAT CTCTTGTTTT GCACCATGAT
GAGCAGTCCG TTTTATGCGC AGTCGAGTTG GCTCTTGAGG ACGGTGTGCC AACTAAAACT
CATGTGCTCA ACGTGCTGCA CCGCCTGATT GACGGCAAGG CGCCACCGGC ACCAACGATC
GATGCCCCGC AGGCCCTGCG CCTTAGCACG GAGCCCAAAG CCGATGTAGG CCGCTACGAC
ACGCTGAGGG AGCTGCGTCA TGCGTCATGA
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| Protein sequence | MIDMDLLSVI RRWHFRQGMA IREIKRRTGL SRNTIRKYLR ADAVEPVFKV PDRPSKLDPF
SEKLTGWLRV ESGKSRKQKR TAKQLYADLV TLGYDGSYAR VAAFARDWKR DRQYEQQTSG
RGTFVPLVFQ PGEAFQFDWS EDYAVLGGKQ VKLQVAHTKL SHSRAYIVRA YLLQTHEMLF
DALTQAFRVL GGIPQRGIFD NMKTAVDKIG RGKARQVNAR FAALASHYLF ETDFCNPASG
WEKGQVEKNV QDARHRLWQP MPSFPDLAAL NAWLEEQCVA QWAEIQHGTL PGTIADVHAE
EVISLMPMGR PFDGFVEQTK RVSPTCLIAF ERNRYSVPAS FANRPVSLRV YPERLVIVAE
GQVLCEHERI IDRSHQKPGR TIYDWRHYLA VVQRKPGALR NGAPFLEMPE AFRQLQTQLL
KRLGGDKEMV EILSLVLHHD EQSVLCAVEL ALEDGVPTKT HVLNVLHRLI DGKAPPAPTI
DAPQALRLST EPKADVGRYD TLRELRHAS
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