| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1248 |
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| Symbol | |
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| ID | 4080319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1299091 |
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| End bp | 1300071 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009608 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_616296 |
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| Protein GI | 103486735 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.955135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCA AGACGCGGAT TACGGAGATG CTGGGGATTG CGCATCCGAT CGTCCAGGGG
GGGATGCAGA GCGTGGGCTA TGCCGAACTG GCGAGTGCGG TGTCGAACGC GGGCGGGCTT
GGCATATTGA CCGCGCTGAC GCAGCCGGAC CCTGGGGCAT TGCGCGCCGA GATCGAGCGC
TGCCGCGCGA TGACCGACAA GCCGTTCGGC GTGAACCTGA CTGTATTTCC GACGATCAAC
GCCCCCGACT ACAAGGCCTA TGCGCAGGCG ATCATCGACG GCGGGGTCAA GATCGTCGAG
ACCGCGGGCA CGCAGGCGGT GCGCGAGATA TGGGAGATGC TGAAGCCGCA CGGGGTCACC
ATCCTCCACA AATGCACCGC GGTGCGCCAC GCGCTGTCGG CCGAGCGCGC GGGCTGCGAC
ATCATTTCGA TCGACGGCTT CGAATGCGCG GGTCACCCCG GCGAGGACGA TGTTCCCGGC
CTGATCCTGA TCCCGGCCGC CGCCGACAAG GTGAAGATCC CGATGCTCGC CTCGGGCGGC
TTCGGCGACG GGCGGGGGCT CGTCGCGGCG CTGTCGCTCG GCGCCGAAGG CATCAACATG
GGCACACGCT TCTGCGCGAC GGTCGAGGCG CCGATCCACG ACAATGTCAA ACAGGCCTAT
ATCGACAATG ACGAGCGCGG CAGCTTCCTG ATCTTCCGCA GCCTGAAAAA CACCGCGCGG
GTCGGCAAAA ACGCGGTCAG CGAGGAGGTC GTGCGCCGCC TTTCGGTTCC CGGCGCCACC
TTCGCCGACG TGGCCGAACT GGTCAACGGC AAGGCAGGTC GCGAACTGCT CGAAACCGGC
GACCTTTCCA GGGGCGTGTT CTGGGCCGGA ATGGTCCAGG GGCTCATCCA CGACATCCCA
ACATGCCAGC AACTCGTCGA ACGCATCATT GCCGAGGCGG AGGACATATT GGATCGCCGG
ATCGCCGGAT TTCGCGCCTG A
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| Protein sequence | MAFKTRITEM LGIAHPIVQG GMQSVGYAEL ASAVSNAGGL GILTALTQPD PGALRAEIER
CRAMTDKPFG VNLTVFPTIN APDYKAYAQA IIDGGVKIVE TAGTQAVREI WEMLKPHGVT
ILHKCTAVRH ALSAERAGCD IISIDGFECA GHPGEDDVPG LILIPAAADK VKIPMLASGG
FGDGRGLVAA LSLGAEGINM GTRFCATVEA PIHDNVKQAY IDNDERGSFL IFRSLKNTAR
VGKNAVSEEV VRRLSVPGAT FADVAELVNG KAGRELLETG DLSRGVFWAG MVQGLIHDIP
TCQQLVERII AEAEDILDRR IAGFRA
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