Gene Sala_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1244 
Symbol 
ID4080315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1294604 
End bp1295851 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content66% 
IMG OID638009604 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_616292 
Protein GI103486731 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.023257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG CCTATATCAT CGACGCCGTC CGCACCCCGC GCGGGATTGG CAAGCCCGGC 
AAGGGCGCGT TGTCGCATCT CCACCCGCAG CATCTCGCCG CAACGGTGCT GAAGGCGATC
AGGGATCGCA ATAATCTCGA CACCGCGACG GTCGACGACA TCATCTGGTC GACGTCGAGC
CAGAATGGCA AGCAGGGCGG CGACCTCGGC CGCATGGCGG CGCTGTCGGC GGGTTATGAC
ATCAAGGCAT CGGGAACGAC GCTCGACCGC TTCTGCGGCG GCGGCATCAC CTCGGTCAAT
CTCGCCGCGG CGACGGTGAT GAGCGGCATG GAGGATTGCG TCGTCGCGGG CGGCACCGAG
ATGATGAGCT ACACCAGCGC CTTTGCCGCC GAACAGGCGA ACGCCGGCCT GCCGCCGCGC
CTGATGGGGT CGGGCCATGA GGCGCTCGAC GAGCTTCACC CGCAGTCGCA TCAGGGCGTG
TGCGGCGACG CCATCGCAAC GATCGAAGGG ATCGGCCGCG AGGCGCTCGA TGCGCTCGCA
CTCGTCAGCC AGCGGCGCGC CGACCGTGCG ATCAAGGAAG GTCGCTTCGC CAAATCGCTG
GTGCCCGTGC TCAACCCCGA CGGCAGCATC GCACTCGACC ATGAGGAGTT TCCGCGCCCC
GAAACCAGCG CCGAAGGTCT CGCCGCGCTC AAGCCGAGTT TTGCCGCGCT CGCCGATTTC
GACATGGGCG GCTTCACCTT CCGCCAGCAG ATCAATCGTC GCTATCCCGA TCTCGAAATC
CAGCATTTTC ACCATGCCGG CAATTCATCG GGGGTCGTCG ATGGCGCTGC GGCGCTGCTC
GTCACCTCGA AGGCCTATGC CGACAAACAC GGCCTGAAAC CCCGCGCGCG CATCGTCGCC
TACGCCAATA TCGGCGACGA TCCGACCTTG ATGCTCAACG CCCCGGTCCC CGCGGCGAAG
AAGGTGCTCG ATAAGGCGGG GCTGACCAGG GACGACATCG ACGTCTGGGA AATCAACGAG
GCTTTCGCCG TCGTTGCGGA GAAGTTCATC CGCGACCTCG ACCTGCCCCG CGACAAGGTC
AACATCAACG GCGGCGCGAT GGCGCTCGGC CACCCGATCG GCGCCACCGG ATCGATCCTG
ATCGGCACCG CGCTCGACGA GCTGGAACGC TCGGGCGGTC GTTACGGCCT CGTCACCATG
TGCGCCGCCG GCGGCATGGC GCCCGCGATC ATCATCGAGC GGCTGTGA
 
Protein sequence
MAEAYIIDAV RTPRGIGKPG KGALSHLHPQ HLAATVLKAI RDRNNLDTAT VDDIIWSTSS 
QNGKQGGDLG RMAALSAGYD IKASGTTLDR FCGGGITSVN LAAATVMSGM EDCVVAGGTE
MMSYTSAFAA EQANAGLPPR LMGSGHEALD ELHPQSHQGV CGDAIATIEG IGREALDALA
LVSQRRADRA IKEGRFAKSL VPVLNPDGSI ALDHEEFPRP ETSAEGLAAL KPSFAALADF
DMGGFTFRQQ INRRYPDLEI QHFHHAGNSS GVVDGAAALL VTSKAYADKH GLKPRARIVA
YANIGDDPTL MLNAPVPAAK KVLDKAGLTR DDIDVWEINE AFAVVAEKFI RDLDLPRDKV
NINGGAMALG HPIGATGSIL IGTALDELER SGGRYGLVTM CAAGGMAPAI IIERL