Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1244 |
Symbol | |
ID | 4080315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1294604 |
End bp | 1295851 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009604 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_616292 |
Protein GI | 103486731 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.023257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGAAG CCTATATCAT CGACGCCGTC CGCACCCCGC GCGGGATTGG CAAGCCCGGC AAGGGCGCGT TGTCGCATCT CCACCCGCAG CATCTCGCCG CAACGGTGCT GAAGGCGATC AGGGATCGCA ATAATCTCGA CACCGCGACG GTCGACGACA TCATCTGGTC GACGTCGAGC CAGAATGGCA AGCAGGGCGG CGACCTCGGC CGCATGGCGG CGCTGTCGGC GGGTTATGAC ATCAAGGCAT CGGGAACGAC GCTCGACCGC TTCTGCGGCG GCGGCATCAC CTCGGTCAAT CTCGCCGCGG CGACGGTGAT GAGCGGCATG GAGGATTGCG TCGTCGCGGG CGGCACCGAG ATGATGAGCT ACACCAGCGC CTTTGCCGCC GAACAGGCGA ACGCCGGCCT GCCGCCGCGC CTGATGGGGT CGGGCCATGA GGCGCTCGAC GAGCTTCACC CGCAGTCGCA TCAGGGCGTG TGCGGCGACG CCATCGCAAC GATCGAAGGG ATCGGCCGCG AGGCGCTCGA TGCGCTCGCA CTCGTCAGCC AGCGGCGCGC CGACCGTGCG ATCAAGGAAG GTCGCTTCGC CAAATCGCTG GTGCCCGTGC TCAACCCCGA CGGCAGCATC GCACTCGACC ATGAGGAGTT TCCGCGCCCC GAAACCAGCG CCGAAGGTCT CGCCGCGCTC AAGCCGAGTT TTGCCGCGCT CGCCGATTTC GACATGGGCG GCTTCACCTT CCGCCAGCAG ATCAATCGTC GCTATCCCGA TCTCGAAATC CAGCATTTTC ACCATGCCGG CAATTCATCG GGGGTCGTCG ATGGCGCTGC GGCGCTGCTC GTCACCTCGA AGGCCTATGC CGACAAACAC GGCCTGAAAC CCCGCGCGCG CATCGTCGCC TACGCCAATA TCGGCGACGA TCCGACCTTG ATGCTCAACG CCCCGGTCCC CGCGGCGAAG AAGGTGCTCG ATAAGGCGGG GCTGACCAGG GACGACATCG ACGTCTGGGA AATCAACGAG GCTTTCGCCG TCGTTGCGGA GAAGTTCATC CGCGACCTCG ACCTGCCCCG CGACAAGGTC AACATCAACG GCGGCGCGAT GGCGCTCGGC CACCCGATCG GCGCCACCGG ATCGATCCTG ATCGGCACCG CGCTCGACGA GCTGGAACGC TCGGGCGGTC GTTACGGCCT CGTCACCATG TGCGCCGCCG GCGGCATGGC GCCCGCGATC ATCATCGAGC GGCTGTGA
|
Protein sequence | MAEAYIIDAV RTPRGIGKPG KGALSHLHPQ HLAATVLKAI RDRNNLDTAT VDDIIWSTSS QNGKQGGDLG RMAALSAGYD IKASGTTLDR FCGGGITSVN LAAATVMSGM EDCVVAGGTE MMSYTSAFAA EQANAGLPPR LMGSGHEALD ELHPQSHQGV CGDAIATIEG IGREALDALA LVSQRRADRA IKEGRFAKSL VPVLNPDGSI ALDHEEFPRP ETSAEGLAAL KPSFAALADF DMGGFTFRQQ INRRYPDLEI QHFHHAGNSS GVVDGAAALL VTSKAYADKH GLKPRARIVA YANIGDDPTL MLNAPVPAAK KVLDKAGLTR DDIDVWEINE AFAVVAEKFI RDLDLPRDKV NINGGAMALG HPIGATGSIL IGTALDELER SGGRYGLVTM CAAGGMAPAI IIERL
|
| |