| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1242 |
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| Symbol | |
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| ID | 4080313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1292041 |
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| End bp | 1293171 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009602 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_616290 |
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| Protein GI | 103486729 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.508284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGTC CGCTGCACGG CATCAAGATC ATCGAGTTCG CCGGGATCGG CCCCGGCCCC
TTCTGCGCGA TGATGCTCGC CGACCATGGC GCCGAGGTGA TCCGTATCGA CCGGCCCGAC
GGCTTCCTCG ACCCGCGCGA TCCCCTGTCG CGCAATCGCA CGTCGATCGC ACTCGACATG
AAAAAGCCCG ACGCGGTGCA GATCGCGCGT GACCTGTGCC GCGGCGCCGA TGCGATCATC
GAAGGTTATC GCCCCGGCGT GATGGAGCGC CTTGGCCTTG GCCCCGACGT CCTGCTCGCC
GACAATCCAA GGCTCGTTTA CGGCCGCATG ACCGGCTGGG GGCAGTATGG CCCCTATTCG
CAGGCGGCGG GCCACGACAT CAATTATATC GCGCTGTCGG GCGTCCTCCA CGGCATCGGG
CGCGCCGGTG AAAAGCCCGT GCCGCCGGTC AATTATGTCG GCGATTTCGG CGGCGGCGGC
ATGATGCTGG CGTTCGGCAT GACGAGCGCG CTGCTCCACG CCGCGCGGAC CGGCGAGGGC
CAGGTGATCG ATTGCGCGAT GACCGACGGG TCGGCGCTGC TCGCGGGCAT GACGTGGGGC
TTCAAGGCGA TGGGGCGGCT CAAGGACGAA GCCGGGGTCA ATATGCTCGA CGGCGGCGCG
CATTTCTATG ACACTTACCG CTGCGCCGAC GGCAAGTTCA TCTCGATAGG GTCGATCGAG
CCTCAATTCT ATGCCCTGCT GCGCCAAAAG ACCGGCCTCG ACGCCGACCC CGATTTCGAC
GCCCAGCACG ATCCGTCGAA ATGGGGGCCG CTCAAGGACA AGCTGACGGC GCTGTTCGCG
ACCAAAACGC GCGATGAATG GTGCGCGATC ATGGAAATGA CCGACATCTG CTTTGCACCC
GTCCTCTCGC TCGAAGAGGC GCCGCAGCAC CCGCACAATG TGGCGCGCGA GACGTTCATC
GACATAGGCG GCGCAATCCA GCCCGCCCCG GCGCCGCGTT ATTCGGTCAC CTCCAACGAC
ACGCCGCGCG CCGCGCCGAC CGTCGGCGCG GATGGCGATG CAGTGCTGGC GGCGCTGGGC
TATGACGCCG GCAGGATCGC GGCGCTGCGC GAAGGCGGCG CGGTGCATTA G
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| Protein sequence | MTGPLHGIKI IEFAGIGPGP FCAMMLADHG AEVIRIDRPD GFLDPRDPLS RNRTSIALDM
KKPDAVQIAR DLCRGADAII EGYRPGVMER LGLGPDVLLA DNPRLVYGRM TGWGQYGPYS
QAAGHDINYI ALSGVLHGIG RAGEKPVPPV NYVGDFGGGG MMLAFGMTSA LLHAARTGEG
QVIDCAMTDG SALLAGMTWG FKAMGRLKDE AGVNMLDGGA HFYDTYRCAD GKFISIGSIE
PQFYALLRQK TGLDADPDFD AQHDPSKWGP LKDKLTALFA TKTRDEWCAI MEMTDICFAP
VLSLEEAPQH PHNVARETFI DIGGAIQPAP APRYSVTSND TPRAAPTVGA DGDAVLAALG
YDAGRIAALR EGGAVH
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