| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1236 |
|---|
| Symbol | |
|---|
| ID | 4080307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1285050 |
|---|
| End bp | 1285577 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638009596 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616284 |
|---|
| Protein GI | 103486723 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2852] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.453512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGA GGGGCCAAAG CCCCTCTCCC CTTGCGGGAG AGGGGTTGGG GAGTGGGGTC
CGCGCCGCGG CAGCGGCGCA CAAGACTCTC TCCGAAGTTC TCGCTCGCAA AGCCCTGTTG
CTGGACCGCG TCCGCCAAAT GCGATCGAAT CCCACTGATG CCGAACGGCA CCTATGGTCG
ATCCTCCGTG CTGGTCGTCT CGAAGGTCTG AGATGGCGGC GTCAGGAGGT CATCGACGAC
CGCTATATTG CTGATTTCCT CTGCTACGAG CATCGGTTGA TCGTCGAGGC CGATGGAGGC
CAGCATGGCG ACAATCCTCA TGATGCCGAG CGCGACACCT ATCTGACCGC ACAGGGCTTT
CGCATCCTGC GCTTCTGGAA CAACGACATC CTCGCCAACA GCGAAGGCCT AGTCGCGAGC
ATCCTCGATG CCATCGATTC TCTTGGCGCG CAGACGCGCG CCGACCCCAC ACCCCAACCC
CTCTCCCGCA AGGGGAGAGG GGCTTTTGAA GGAGCCCATA ATGGCTGA
|
|---|
| Protein sequence | MPARGQSPSP LAGEGLGSGV RAAAAAHKTL SEVLARKALL LDRVRQMRSN PTDAERHLWS
ILRAGRLEGL RWRRQEVIDD RYIADFLCYE HRLIVEADGG QHGDNPHDAE RDTYLTAQGF
RILRFWNNDI LANSEGLVAS ILDAIDSLGA QTRADPTPQP LSRKGRGAFE GAHNG
|
|---|
| |