| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1235 |
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| Symbol | |
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| ID | 4080306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1283738 |
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| End bp | 1285048 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009595 |
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| Product | dihydrolipoamide acetyltransferase, long form |
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| Protein accession | YP_616283 |
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| Protein GI | 103486722 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.97413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCG AACTCAAGAT GCCCGCTCTC TCGCCGACGA TGGAGGAGGG CACGCTCGCC
AAATGGCTTG TGAAGGAGGG CGATGAGGTC AAGTCGGGCG ACCTGCTCGC CGAGATCGAA
ACCGACAAGG CGACAATGGA GTTCGAAGCG GTCGATGAGG GTGTGATCAG CCAGATACTC
GTCGCCGAGG GGACCGACGG CGTGAAGGTC GGCACGGTGA TCGCGGTGAT CGCGGGCGAG
GGGGAGGATG CGGGCGAAGC GAAGGCGACG CCTGCTGCTG CGCCTGCGCC GGTTCCGGCA
AAAGACGTCG CCCCAGCGGA AGCTGGGGCC GCTACCGTCA GTGCACCTCC GCCAGCGGTC
CTAGCTTCCG CTGGGACGAC GAATGTGGGC GACCGCATCA AAGCCAGCCC GCTCGCCAGG
CGCCTCGCTG CCGAGCAAGG CATCGACCTC AAAAAGCTGA CCGGCACCGG CCCCGGCGGC
CGCATCGTCA AGGCCGACCT TGAAGGCGCG CCCACAGGCG CCGCTGCATC CACTGCCGTC
GCCCCCGCGC AGGCGGGGGC CGCTGTCGGC ACGGCGCCCG CTGCCGCACC GGAACCGGCC
GGCCCGATCC CCGATTTCGG CATCCCGCAT GAGGATGAAA AGCTGTCGGG GATGCGCAAG
ACGATCGCGC GCCGCCTGAG CCAGTCGATG CAGGACGCGC CGCACATCTA CCTCACCGTC
GACATCCGCC TCGACGCGCT GCTCAAGCTC CGCGGCGAGC TTAACGCGAG CCTGGAGAGC
CGCGGGGTCA AGCTGAGCGT CAACGACATG CTGATCAAGG CGCTCGCGGT CGCGCTCGAG
CGCGTCCCGC AGTGCAACGT CAGCTTTGGC GGCGACGTGA TGCGCTTTTA CAAGCGCGCC
GACATTTCGG TCGCGGTCAG CATCCCCGGC GGCCTCATCA CCCCGATCAT CACCGATGCG
GGGGCCAAGT CGCTGTCGAA AATCTCGACC GAAATGGCCG AGCTCGCGGG CCGCGCCAAG
GAAGGCAAGC TGCAACCGCA CGAATATCAG GGCGGCACCG CCAGCATCTC GAACATGGGC
ATGATGGGGA TCAAGCAGTT CACCGCGGTG ATCAACCCGC CGCAGGCGAT GATCATGGCG
ATCGGCGCGG GCGAAAAGCG GCCCTATGTC GTCGACGATG CGCTGGCGAT CGCGACGGTC
ATGTCGGCGA CCGGCAGCTT CGACCACCGC GCGATCGACG GGGCGGACGG GGCGCTCTTG
ATGAAGACGT TCAAGGAACT GGTGGAAAGC CCGCTGGGGC TGGTGGCGTA A
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| Protein sequence | MPIELKMPAL SPTMEEGTLA KWLVKEGDEV KSGDLLAEIE TDKATMEFEA VDEGVISQIL
VAEGTDGVKV GTVIAVIAGE GEDAGEAKAT PAAAPAPVPA KDVAPAEAGA ATVSAPPPAV
LASAGTTNVG DRIKASPLAR RLAAEQGIDL KKLTGTGPGG RIVKADLEGA PTGAAASTAV
APAQAGAAVG TAPAAAPEPA GPIPDFGIPH EDEKLSGMRK TIARRLSQSM QDAPHIYLTV
DIRLDALLKL RGELNASLES RGVKLSVNDM LIKALAVALE RVPQCNVSFG GDVMRFYKRA
DISVAVSIPG GLITPIITDA GAKSLSKIST EMAELAGRAK EGKLQPHEYQ GGTASISNMG
MMGIKQFTAV INPPQAMIMA IGAGEKRPYV VDDALAIATV MSATGSFDHR AIDGADGALL
MKTFKELVES PLGLVA
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