Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1232 |
Symbol | |
ID | 4080456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1281819 |
End bp | 1282604 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009592 |
Product | XRE family transcriptional regulator |
Protein accession | YP_616280 |
Protein GI | 103486719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.124507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCG CACCCGTCGG CGAACAGCTT CGCGAATGGC GCGTCCGTCG CCGGATGAGC CAGATGGATC TCGCGCTCGA AAGCGAGATT TCGACCCGGC ACCTGAGCTT TATCGAGACG GGGCGCTCGC GGCCGAGCGC GCTGATGCTG CAACGCATCG CCGATTGCCT GGAGGTGCCT AACCGCGCGC GCAACGCGAT GCTTCTGGCG GCGGGCTATG CCCCCGATTA TCGCGAACGC GACCTGAACA GCCCCGAAAT GGCGGGGATG AAGGCGATCG TCGACCATGT GCTGAAGGGT CACGAGCCCT ATCCCGCGCT CGCGGTCGAC CGGCACTGGA ACATGATCGC CGCCAATGAT GCCGTCGCGC TGCTCACGCG GCTCGCGGCG CCCGAATTGC TCGCGCCGCC GGTCAATGTG CTCCGCGTCG CGCTGCACCC CGACGGGCTC GCGCGGCATA TCGTCAACCT TGGCGAATGG CGCGCGCACC TGCTCGAGCG GCTCGATCAC CAGATCGACG CGAGCGCCGA TGCGGGGCTG ATCGCGCTGC GCAGCGAACT TGCGGGTTAT GGTGGGAGCA CGGGCGAGCA TGAGGGTAAC GCAGCAAACG GCATCGCGGT GCCGCTGATC CTCGACACCC CGCTGGGACA GATCCGCTTC GTCTCGACCG TGACGATCTT TGGCACGCCG GTCGACATCA CCCTCTCCGA ACTCGCGATC GAGGCTTTTT TCCCGGCGGA TGCGGAGAGT GCGGCGCTGT TGCAGAAAAT GGCTGGGAAT GCATAA
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Protein sequence | MTPAPVGEQL REWRVRRRMS QMDLALESEI STRHLSFIET GRSRPSALML QRIADCLEVP NRARNAMLLA AGYAPDYRER DLNSPEMAGM KAIVDHVLKG HEPYPALAVD RHWNMIAAND AVALLTRLAA PELLAPPVNV LRVALHPDGL ARHIVNLGEW RAHLLERLDH QIDASADAGL IALRSELAGY GGSTGEHEGN AANGIAVPLI LDTPLGQIRF VSTVTIFGTP VDITLSELAI EAFFPADAES AALLQKMAGN A
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